BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g1770.1
(212 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 91 7e-21
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 91 7e-21
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 76 1e-16
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 66 2e-13
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 90.9 bits (224), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 52/81 (64%)
Query: 4 DPISYEEVIQNKKWENAMNEEINAIEKNDTWEWTRLPKGYKPIGVKWVYKTKKNASGKVQ 63
+P +Y E + W AM++EI A+E TWE LP KPIG KWVYK K N+ G ++
Sbjct: 85 EPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIE 144
Query: 64 RYNARLVDKGYKQRAGIDYSE 84
RY ARLV KGY Q+ GID+ E
Sbjct: 145 RYKARLVAKGYTQQEGIDFIE 165
Score = 60.1 bits (144), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%)
Query: 89 GIFISQSGYDKELLKRFKMESCNPVNTHFESRVELRKCTRSSDIDPTYFKSLIGSLHYLT 148
GI I Q Y +LL + C P + + V + +D ++ LIG L YL
Sbjct: 330 GINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQ 389
Query: 149 CIRPDILYGFVLVSRYMETPDESHLNVAKRLLQYIKGTLNDGLFSLAHKILSLLVI 204
R DI + +S++ E P +H ++L YIKGT+ GLF + + L V
Sbjct: 390 ITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVF 445
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 90.9 bits (224), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 52/81 (64%)
Query: 4 DPISYEEVIQNKKWENAMNEEINAIEKNDTWEWTRLPKGYKPIGVKWVYKTKKNASGKVQ 63
+P +Y E + W AM++EI A+E TWE LP KPIG KWVYK K N+ G ++
Sbjct: 85 EPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIE 144
Query: 64 RYNARLVDKGYKQRAGIDYSE 84
RY ARLV KGY Q+ GID+ E
Sbjct: 145 RYKARLVAKGYTQQEGIDFIE 165
Score = 60.1 bits (144), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%)
Query: 89 GIFISQSGYDKELLKRFKMESCNPVNTHFESRVELRKCTRSSDIDPTYFKSLIGSLHYLT 148
GI I Q Y +LL + C P + + V + +D ++ LIG L YL
Sbjct: 330 GINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQ 389
Query: 149 CIRPDILYGFVLVSRYMETPDESHLNVAKRLLQYIKGTLNDGLFSLAHKILSLLVI 204
R DI + +S++ E P +H ++L YIKGT+ GLF + + L V
Sbjct: 390 ITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVF 445
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 75.9 bits (185), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 64/105 (60%), Gaps = 1/105 (0%)
Query: 88 NGIFISQSGYDKELLKRFKMESCNPVNTHFESRVELRKCTRSSDIDPTYFKSLIGSLHYL 147
+G+F+SQ+ Y +++L M C P++T ++ + + DP+ F+S++G+L YL
Sbjct: 52 SGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYL 110
Query: 148 TCIRPDILYGFVLVSRYMETPDESHLNVAKRLLQYIKGTLNDGLF 192
T RPDI Y +V + M P + ++ KR+L+Y+KGT+ GL+
Sbjct: 111 TLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLY 155
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 66.2 bits (160), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%)
Query: 4 DPISYEEVIQNKKWENAMNEEINAIEKNDTWEWTRLPKGYKPIGVKWVYKTKKNASGKVQ 63
+P S +++ W AM EE++A+ +N TW P +G KWV+KTK ++ G +
Sbjct: 27 EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86
Query: 64 RYNARLVDKGYKQRAGIDYSE 84
R ARLV KG+ Q GI + E
Sbjct: 87 RLKARLVAKGFHQEEGIYFVE 107