BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000010.1_g0140.1
(175 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_002489193.1 hypothetical protein SORBIDRAFT_0013s009070, part... 55 8e-06
>XP_002489193.1 hypothetical protein SORBIDRAFT_0013s009070, partial [Sorghum
bicolor]
Length = 1219
Score = 55.1 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 8/143 (5%)
Query: 3 INFDMHGSFVEDRIGGNMHSRHIVTEDLKGFWNRDTEVLKQILQ---FRSECSKSSIFCL 59
++ M G + D++GG +H +V D R E+ K++ + S++F L
Sbjct: 788 VDLHMLGPLMLDQVGGEVHRTDVVAVDQCAPGERAVELGKELPEPGSLSHAVCHSAVFRL 847
Query: 60 SRASGNSRLFLGLPRQQARTKHGEVTDGRATGDRATGPIRI---DKVGNGQSAGRRKKEA 116
+G+ RL G P Q + V GRA G R GP+ + D++G G+ K+ A
Sbjct: 848 GTGAGDDRLAFGRPEHQVAAQKDGVAGGRAPGVRTPGPVGVSVDDELGGGRPP--VKEAA 905
Query: 117 MILGAFQIEKNPRSRTHMVEVGI 139
+ G ++ K+P T + G+
Sbjct: 906 EVDGVTEVAKDPLESTGGLSSGV 928