BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000010.1_g0380.1
(687 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010256585.1 PREDICTED: pentatricopeptide repeat-containing pr... 1112 0.0
XP_002279360.1 PREDICTED: pentatricopeptide repeat-containing pr... 1099 0.0
XP_009374255.1 PREDICTED: pentatricopeptide repeat-containing pr... 1077 0.0
>XP_010256585.1 PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Nelumbo nucifera]
Length = 742
Score = 1112 bits (2875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/687 (74%), Positives = 593/687 (86%), Gaps = 1/687 (0%)
Query: 1 MLRIGLFFDSYSASRLITICTLSSFSLNLDYTQKVFDQIPHPNIYTWNTLIRAYSSSDNP 60
MLR G FF YSASRLIT+CTLS F+ +L+Y ++VFDQI PN+YTWNTLIRAY+S P
Sbjct: 57 MLRTGAFFHPYSASRLITMCTLSPFA-SLEYARRVFDQISQPNVYTWNTLIRAYASGPEP 115
Query: 61 TQSILMFTQMLHECPDPPNKFTFPFLIKAASEISGLREGQVFHGMAVKASLDSDVYILNS 120
+++L+F +MLH+CPDPPNKFTFPF IKA SE+S REG+ FHGM VKASL SDVYILNS
Sbjct: 116 HRALLIFCKMLHQCPDPPNKFTFPFGIKATSELSASREGRAFHGMVVKASLASDVYILNS 175
Query: 121 LIHFYASCGDINQAYKLFMKIPERDVVSWNSMITAFSQANFPDEALELFREMVRENVKPN 180
L+HFYA+CGD++QAY++F+ IP RDVVSWNSMITAF+QAN P EALELFR M E +KPN
Sbjct: 176 LVHFYAACGDLDQAYQVFVNIPNRDVVSWNSMITAFAQANRPKEALELFRMMEMEKIKPN 235
Query: 181 DVTMISVLSACSKKSNLAFGKWVHSYIEKNEIEDSLILDNALLDMYMKCGTLEEAKRIFK 240
DVTM+SVLSAC+K +L FG WVHSYIE+NEI+ LIL NA+LDMY KCG+L EAKR+F
Sbjct: 236 DVTMVSVLSACAKNLDLEFGTWVHSYIERNEIDMDLILSNAMLDMYTKCGSLGEAKRLFD 295
Query: 241 KMPEKDSVSWTTMLVGFASFGEFDAARCLFNEMPSQDIAAWNSLISAYEQSGQPKPALAI 300
MPEKDS SWTTM+ G+A GEFDAARC F+ MP++DIAAWN+LISAYEQSGQ + AL++
Sbjct: 296 MMPEKDSFSWTTMITGYAKSGEFDAARCFFDAMPARDIAAWNALISAYEQSGQAREALSL 355
Query: 301 FHELQLSKKAKPDQITLVSTLSACAQLGAIDLGGWIHVYIKKQGLKLNCHLTTSLIDMYS 360
FHELQLS A PDQ T VS LSACA+LG ++LG WIH+YI KQG+KLNCHL TSLIDMYS
Sbjct: 356 FHELQLSSSATPDQFTHVSVLSACAELGTMNLGSWIHIYINKQGIKLNCHLATSLIDMYS 415
Query: 361 KCGDLDKAFEVFRFADRKDVYVWSAMIGGLAMHGRGRDAIDLFLKMQEAEVQPNEVTFTN 420
KCGDLDKA EVF+ +KDVYVWS+MI GLAMHGRGRDAI LF +MQEA V+PN +TFTN
Sbjct: 416 KCGDLDKALEVFQSMGKKDVYVWSSMIAGLAMHGRGRDAIHLFFQMQEAMVKPNAITFTN 475
Query: 421 VLCACSHAGLVEEGRLYFNQMLPIYGISPQVKHYACMVDILGRAGFLEEAMELIEKMSIA 480
VLCACSHAGLVEEG+LYF+QML +YGI+P++KHY CMVDILGRAG L+EA++ I+ M I
Sbjct: 476 VLCACSHAGLVEEGKLYFDQMLAVYGITPEIKHYGCMVDILGRAGLLDEAVQFIQNMPIV 535
Query: 481 PGASVWGALLGACKTHENVNLAEQACSRLLELEPRNHGAYVLLSNVYAKFGKWDKVSQLR 540
PGASVWGALL AC+TH NV LAE AC++LLELEPRNHGAYVLLSN+YAKFGKWDKVS LR
Sbjct: 536 PGASVWGALLSACRTHGNVELAEYACNQLLELEPRNHGAYVLLSNIYAKFGKWDKVSMLR 595
Query: 541 KLMRDNGIKKEPGCSLIEVDGTVHEFLVGDNSHPLSKMIYSKLDEIASRLKSTGYVTKKS 600
KLMR++GI+KEPGCS IEVDG VHEFLVGDNSHPLS+ IYSKLDEI +LKS GYV KS
Sbjct: 596 KLMRNSGIRKEPGCSSIEVDGVVHEFLVGDNSHPLSRAIYSKLDEIMVKLKSIGYVPNKS 655
Query: 601 NLLQDIEEEDVKEHALYLHSEKLAIAFGLISTSPSTPIRVVKNLRVCGDCHSVAKLISRL 660
+LLQ++EEEDVKEHALYLHSEKLAIAFGLIS P P+R++KN+R+C DCHSVAKLIS+L
Sbjct: 656 DLLQNVEEEDVKEHALYLHSEKLAIAFGLISVDPPKPVRIMKNIRICRDCHSVAKLISKL 715
Query: 661 YNRDILLRDRYRFHHFKDGHCSCMDYW 687
Y+R+ILLRDRYRFHHFK G CSCMDYW
Sbjct: 716 YDREILLRDRYRFHHFKKGQCSCMDYW 742
>XP_002279360.1 PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 743
Score = 1099 bits (2843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/687 (74%), Positives = 591/687 (86%), Gaps = 1/687 (0%)
Query: 1 MLRIGLFFDSYSASRLITICTLSSFSLNLDYTQKVFDQIPHPNIYTWNTLIRAYSSSDNP 60
MLR GLFFD +SASRLIT LS F +LDY Q+VFDQIPHPN+YTWNTLIRAY+SS NP
Sbjct: 58 MLRTGLFFDPFSASRLITAAALSPFP-SLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNP 116
Query: 61 TQSILMFTQMLHECPDPPNKFTFPFLIKAASEISGLREGQVFHGMAVKASLDSDVYILNS 120
QS+L+F +MLH+ PD P+KFTFPFLIKAASE+ L G+ FHGM +K L SDV+ILNS
Sbjct: 117 HQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNS 176
Query: 121 LIHFYASCGDINQAYKLFMKIPERDVVSWNSMITAFSQANFPDEALELFREMVRENVKPN 180
LIHFYA CG++ Y++F+ IP RDVVSWNSMITAF Q P+EALELF+EM +NVKPN
Sbjct: 177 LIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPN 236
Query: 181 DVTMISVLSACSKKSNLAFGKWVHSYIEKNEIEDSLILDNALLDMYMKCGTLEEAKRIFK 240
+TM+ VLSAC+KKS+ FG+WVHSYIE+N I +SL L NA+LDMY KCG++E+AKR+F
Sbjct: 237 GITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFD 296
Query: 241 KMPEKDSVSWTTMLVGFASFGEFDAARCLFNEMPSQDIAAWNSLISAYEQSGQPKPALAI 300
KMPEKD VSWTTMLVG+A GE+DAA+ +F+ MP+QDIAAWN+LISAYEQ G+PK AL +
Sbjct: 297 KMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALEL 356
Query: 301 FHELQLSKKAKPDQITLVSTLSACAQLGAIDLGGWIHVYIKKQGLKLNCHLTTSLIDMYS 360
FHELQLSK AKPD++TLVSTLSACAQLGA+DLGGWIHVYIKKQG+KLNCHLTTSLIDMY
Sbjct: 357 FHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYC 416
Query: 361 KCGDLDKAFEVFRFADRKDVYVWSAMIGGLAMHGRGRDAIDLFLKMQEAEVQPNEVTFTN 420
KCGDL KA VF +RKDV+VWSAMI GLAMHG G+DAI LF KMQE +V+PN VTFTN
Sbjct: 417 KCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTN 476
Query: 421 VLCACSHAGLVEEGRLYFNQMLPIYGISPQVKHYACMVDILGRAGFLEEAMELIEKMSIA 480
+LCACSH GLVEEGR +FNQM +YG+ P VKHYACMVDILGRAG LEEA+ELIEKM +A
Sbjct: 477 ILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMA 536
Query: 481 PGASVWGALLGACKTHENVNLAEQACSRLLELEPRNHGAYVLLSNVYAKFGKWDKVSQLR 540
P ASVWGALLGAC HENV LAEQACS+L+ELEP NHGAYVLLSN+YAK GKWD+VS LR
Sbjct: 537 PAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLR 596
Query: 541 KLMRDNGIKKEPGCSLIEVDGTVHEFLVGDNSHPLSKMIYSKLDEIASRLKSTGYVTKKS 600
KLMRD G+KKEPGCS IEVDG VHEFLVGDNSHP +K IY+KLDEI +RL++ GYV KS
Sbjct: 597 KLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIGYVPNKS 656
Query: 601 NLLQDIEEEDVKEHALYLHSEKLAIAFGLISTSPSTPIRVVKNLRVCGDCHSVAKLISRL 660
+LLQ +EEEDVKE AL+LHSEKLAIAFGLIST S PIR+VKNLRVCGDCHSVAKL+S+L
Sbjct: 657 HLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQPIRIVKNLRVCGDCHSVAKLVSKL 716
Query: 661 YNRDILLRDRYRFHHFKDGHCSCMDYW 687
Y+R+ILLRDRYRFHHF++GHCSCMDYW
Sbjct: 717 YDREILLRDRYRFHHFREGHCSCMDYW 743
>XP_009374255.1 PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Pyrus x bretschneideri]
Length = 738
Score = 1077 bits (2785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/687 (73%), Positives = 594/687 (86%), Gaps = 1/687 (0%)
Query: 1 MLRIGLFFDSYSASRLITICTLSSFSLNLDYTQKVFDQIPHPNIYTWNTLIRAYSSSDNP 60
MLR GL FD YSAS+LIT+C LSSFS +LDY ++VFDQIP PN+Y+WNTLIRAY+SS +P
Sbjct: 53 MLRTGLLFDPYSASKLITVCALSSFS-SLDYARQVFDQIPQPNLYSWNTLIRAYASSVDP 111
Query: 61 TQSILMFTQMLHECPDPPNKFTFPFLIKAASEISGLREGQVFHGMAVKASLDSDVYILNS 120
T+SIL+F +ML+ C + PNKFT+PF+IKAASE+ L G+ FHGM +KASL SDVYILNS
Sbjct: 112 TESILVFLEMLYRCMESPNKFTYPFVIKAASELRVLELGRGFHGMVIKASLGSDVYILNS 171
Query: 121 LIHFYASCGDINQAYKLFMKIPERDVVSWNSMITAFSQANFPDEALELFREMVRENVKPN 180
L+HFY SCGD++ A ++F+K P++DVVSWNSMITAF+Q N P+EALELF+EM ENVKPN
Sbjct: 172 LVHFYGSCGDLDLARRVFVKTPKKDVVSWNSMITAFTQGNCPEEALELFKEMETENVKPN 231
Query: 181 DVTMISVLSACSKKSNLAFGKWVHSYIEKNEIEDSLILDNALLDMYMKCGTLEEAKRIFK 240
DVTM+SVLSAC+KK +L FG+WV S+IE++EI ++L L+NA+LDMY+KCG++EEAKR+F
Sbjct: 232 DVTMVSVLSACAKKVDLEFGRWVCSHIERSEIGENLTLNNAMLDMYVKCGSIEEAKRLFD 291
Query: 241 KMPEKDSVSWTTMLVGFASFGEFDAARCLFNEMPSQDIAAWNSLISAYEQSGQPKPALAI 300
+M EKD VSWTT+L G+A G +D A +F MPSQDIAAWN LIS+YEQSG+PK ALA+
Sbjct: 292 RMLEKDIVSWTTILDGYAQSGNYDEAWQVFAAMPSQDIAAWNVLISSYEQSGKPKEALAV 351
Query: 301 FHELQLSKKAKPDQITLVSTLSACAQLGAIDLGGWIHVYIKKQGLKLNCHLTTSLIDMYS 360
FH+LQ K KPD++TLVSTL+ACAQLGAIDLGGWIHVY+KKQG+K+NCHLTTSLIDMY+
Sbjct: 352 FHDLQKRKSPKPDEVTLVSTLAACAQLGAIDLGGWIHVYVKKQGMKMNCHLTTSLIDMYA 411
Query: 361 KCGDLDKAFEVFRFADRKDVYVWSAMIGGLAMHGRGRDAIDLFLKMQEAEVQPNEVTFTN 420
KCGDLDKA EVF +R+DV+VWSAMI LAMHG+GR+A+D F +M E +V+PN VTFTN
Sbjct: 412 KCGDLDKALEVFNSVERRDVFVWSAMIAALAMHGKGREALDCFSRMLETKVKPNSVTFTN 471
Query: 421 VLCACSHAGLVEEGRLYFNQMLPIYGISPQVKHYACMVDILGRAGFLEEAMELIEKMSIA 480
VLCACSHAGLV+EGR +F QM P+YG+ P VKHYACMVDILGR+G LEEA ELIEKM IA
Sbjct: 472 VLCACSHAGLVDEGRTFFYQMEPVYGVVPGVKHYACMVDILGRSGNLEEATELIEKMPIA 531
Query: 481 PGASVWGALLGACKTHENVNLAEQACSRLLELEPRNHGAYVLLSNVYAKFGKWDKVSQLR 540
P ASVWGALLGAC H NV LAE+ACS +LEL+PRNHGAYVLLSN+YAK GKW++VS LR
Sbjct: 532 PTASVWGALLGACGLHGNVELAEKACSHMLELDPRNHGAYVLLSNIYAKTGKWEEVSGLR 591
Query: 541 KLMRDNGIKKEPGCSLIEVDGTVHEFLVGDNSHPLSKMIYSKLDEIASRLKSTGYVTKKS 600
+ MRD GIKKEPGCS IEV+G VHEFLVGDNSHPL K IYSKLDEIA RLKS GYV KS
Sbjct: 592 QRMRDAGIKKEPGCSAIEVNGIVHEFLVGDNSHPLCKEIYSKLDEIAGRLKSNGYVPNKS 651
Query: 601 NLLQDIEEEDVKEHALYLHSEKLAIAFGLISTSPSTPIRVVKNLRVCGDCHSVAKLISRL 660
+LLQ +EEED+K HAL LHSEKLAIAFGLIS SPS PI+VVKNLRVCGDCH+VAKLISR+
Sbjct: 652 HLLQFVEEEDMKNHALILHSEKLAIAFGLISLSPSQPIQVVKNLRVCGDCHAVAKLISRV 711
Query: 661 YNRDILLRDRYRFHHFKDGHCSCMDYW 687
Y+R+ILLRDRYRFHHF+DGHCSC DYW
Sbjct: 712 YDREILLRDRYRFHHFRDGHCSCNDYW 738