BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000010.1_g0500.1
(185 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010319563.1 PREDICTED: E3 ubiquitin-protein ligase SDIR1-like... 103 1e-24
XP_002307029.1 hypothetical protein POPTR_0005s06320g [Populus t... 102 2e-23
OAY60235.1 hypothetical protein MANES_01G097100 [Manihot esculenta] 100 3e-23
>XP_010319563.1 PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Solanum
lycopersicum]
Length = 186
Score = 103 bits (256), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Query: 101 ALAESSNHIKMVPASQSSIDKLEKIEFHDDSQLTKNTSCSVCLEEFEKGLVLTKMPCSHI 160
AL ESS+ ++MVPAS+SSI+ LE IE + + N C VCL+E + ++PCSH+
Sbjct: 104 ALQESSSVVEMVPASKSSIELLETIE---NDERNNNDDCLVCLDEIGDETQVLRLPCSHM 160
Query: 161 FHSDCITHWLQTSHYCPICRFQMPI 185
FH+DCIT WLQ SHYCP+CRF+MPI
Sbjct: 161 FHADCITKWLQNSHYCPLCRFEMPI 185
>XP_002307029.1 hypothetical protein POPTR_0005s06320g [Populus trichocarpa]
EEE94025.1 hypothetical protein POPTR_0005s06320g
[Populus trichocarpa]
Length = 246
Score = 102 bits (254), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 64/90 (71%), Gaps = 4/90 (4%)
Query: 96 SDIQRALAESSN-HIKMVPASQSSIDKLEKIEFHDDSQLTKNTSCSVCLEEFEKGLVLTK 154
+DI RA ES + +PA++SSID LE++ F D S T++ C+VC+EE E G T+
Sbjct: 139 ADIARAERESMDIEAGQIPATKSSIDALERVVF-DGSSSTRD--CTVCMEEIEAGSEATR 195
Query: 155 MPCSHIFHSDCITHWLQTSHYCPICRFQMP 184
MPCSH++HSDCI WLQTSH CP+CR+ MP
Sbjct: 196 MPCSHVYHSDCIVQWLQTSHLCPLCRYHMP 225
>OAY60235.1 hypothetical protein MANES_01G097100 [Manihot esculenta]
Length = 220
Score = 100 bits (250), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 81/153 (52%), Gaps = 19/153 (12%)
Query: 44 DIRVLKKAQWIRISPEIQDGISVYDESLEPNTI------------VPIFRLNPDFFKYSA 91
DIRVL K R + SV+ E +E T + + R DFF+
Sbjct: 69 DIRVLVKTLGYRTMTAMGIPESVHAEIMEKITSKSNGYCTWILVEIEMVRTGSDFFR--- 125
Query: 92 TLPMSDIQRALAESSNHIKMVPASQSSIDKLEKIEFHDDSQLTKNTSCSVCLEEFEKGLV 151
P+ + KM+PA++SSI+ LE++ F DD +++T+C+VC+E + G+
Sbjct: 126 --PLDPAEGEGGGFGEGRKMIPATKSSIEGLERLAFEDDD--SRDTTCAVCMETLDVGVE 181
Query: 152 LTKMPCSHIFHSDCITHWLQTSHYCPICRFQMP 184
++PC H++H DCI WLQ SHYCP+CR MP
Sbjct: 182 AIRLPCFHLYHRDCIVKWLQVSHYCPLCRHDMP 214