BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000010.1_g0520.1
(239 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BAG72096.1 Gag-protease-integrase-RT-RNaseH polyprotein [Glycine... 389 e-123
CAN68020.1 hypothetical protein VITISV_003621 [Vitis vinifera] 375 e-119
CBI20118.3 unnamed protein product, partial [Vitis vinifera] 373 e-117
>BAG72096.1 Gag-protease-integrase-RT-RNaseH polyprotein [Glycine max]
Length = 1321
Score = 389 bits (1000), Expect = e-123, Method: Compositional matrix adjust.
Identities = 185/239 (77%), Positives = 205/239 (85%), Gaps = 2/239 (0%)
Query: 1 MHADIGIKRNRIDENSSTLWHRRLGHISIERVKRLVKDGVLKTLDFTDFGTCVDCIKGKQ 60
MH GIKR I+ENSS LWHRRLGHISIER+KRLVKDGVL TLDF DF TC+DCIKGKQ
Sbjct: 375 MHVQTGIKRCNINENSSMLWHRRLGHISIERIKRLVKDGVLNTLDFADFKTCMDCIKGKQ 434
Query: 61 TNKTSKGAKRSSQILEIIHTDICGPFPTPCLNGQRYFISFIDDHTRFMYLYLLFDKAEAF 120
TN + KGA RSS ILEIIHTDIC P +GQ+YFI+FIDD++R+M +YLL +K EA
Sbjct: 435 TNMSKKGANRSSSILEIIHTDICCPDMDA--HGQKYFITFIDDYSRYMNVYLLHNKYEAL 492
Query: 121 DAFKSFKAEVEKQKDMKIKIVRSDRGGEYYGRYTENGQMPGPFAKFLEEEGIVAQYTMPG 180
DAFK FKAEVE Q +IKIVRSDRGGEYYGRYTENGQ PGPFAKFL+E GIVAQYTMPG
Sbjct: 493 DAFKVFKAEVENQCGKQIKIVRSDRGGEYYGRYTENGQAPGPFAKFLQEHGIVAQYTMPG 552
Query: 181 TPQQNGVAERRNRTLMDMVRSMISNTNLPLSLWSEALKTAVYILNRVPSKAVPKTPFEL 239
+P QNGVAERRNRTL+DMVRSM+SN+NLP SLW+EALKTA YILNRVP+KAVPKTPFEL
Sbjct: 553 SPNQNGVAERRNRTLLDMVRSMLSNSNLPKSLWAEALKTAAYILNRVPTKAVPKTPFEL 611
>CAN68020.1 hypothetical protein VITISV_003621 [Vitis vinifera]
Length = 1180
Score = 375 bits (963), Expect = e-119, Method: Compositional matrix adjust.
Identities = 170/239 (71%), Positives = 204/239 (85%)
Query: 1 MHADIGIKRNRIDENSSTLWHRRLGHISIERVKRLVKDGVLKTLDFTDFGTCVDCIKGKQ 60
+H+++G KR I+ENSS LWHRRLGHIS E ++RLVK+G+L+ LDFTDF CVDCIKGKQ
Sbjct: 390 LHSNVGSKRGLINENSSILWHRRLGHISREXIERLVKEGILQNLDFTDFHVCVDCIKGKQ 449
Query: 61 TNKTSKGAKRSSQILEIIHTDICGPFPTPCLNGQRYFISFIDDHTRFMYLYLLFDKAEAF 120
T T KGA RS+++LEIIHTDICGP PC G++YFI+FIDD +R+ Y+YL+ +K++A
Sbjct: 450 TKHTKKGATRSNELLEIIHTDICGPLSVPCFTGEKYFITFIDDLSRYGYVYLMHEKSQAI 509
Query: 121 DAFKSFKAEVEKQKDMKIKIVRSDRGGEYYGRYTENGQMPGPFAKFLEEEGIVAQYTMPG 180
D F+ F EVE+Q D KIKIVRSDRGGEYYGRY E+GQ PGPFAKFLE+ GI AQYTMPG
Sbjct: 510 DIFEMFITEVERQLDKKIKIVRSDRGGEYYGRYDESGQNPGPFAKFLEKHGIRAQYTMPG 569
Query: 181 TPQQNGVAERRNRTLMDMVRSMISNTNLPLSLWSEALKTAVYILNRVPSKAVPKTPFEL 239
TPQQNGVAERRNRTLM+MVRSM+S +++P+SLW E LKTA+YILNRVPSKAVPKTPFEL
Sbjct: 570 TPQQNGVAERRNRTLMEMVRSMMSYSSVPISLWGEXLKTAMYILNRVPSKAVPKTPFEL 628
>CBI20118.3 unnamed protein product, partial [Vitis vinifera]
Length = 1354
Score = 373 bits (957), Expect = e-117, Method: Compositional matrix adjust.
Identities = 170/239 (71%), Positives = 206/239 (86%)
Query: 1 MHADIGIKRNRIDENSSTLWHRRLGHISIERVKRLVKDGVLKTLDFTDFGTCVDCIKGKQ 60
+H+++G KR I+ENSS LWHRRLGHIS ER++RLVK+G+L+ LDFTDF CV+CIKGKQ
Sbjct: 788 LHSNVGSKRGLINENSSILWHRRLGHISRERIERLVKEGILQNLDFTDFHVCVNCIKGKQ 847
Query: 61 TNKTSKGAKRSSQILEIIHTDICGPFPTPCLNGQRYFISFIDDHTRFMYLYLLFDKAEAF 120
T T KGA RS+++LEIIHTDICGP PC G++YFI+FIDD +R+ Y+YL+ +K++A
Sbjct: 848 TKHTKKGATRSNELLEIIHTDICGPLSIPCFTGEKYFITFIDDLSRYGYVYLMHEKSQAI 907
Query: 121 DAFKSFKAEVEKQKDMKIKIVRSDRGGEYYGRYTENGQMPGPFAKFLEEEGIVAQYTMPG 180
D F+ F EVE+Q D KIKIVRSD+GGEYYGRY E+GQ PGPFAKFLE+ GI AQYTMPG
Sbjct: 908 DIFEMFITEVERQLDKKIKIVRSDQGGEYYGRYDESGQNPGPFAKFLEKHGIRAQYTMPG 967
Query: 181 TPQQNGVAERRNRTLMDMVRSMISNTNLPLSLWSEALKTAVYILNRVPSKAVPKTPFEL 239
TPQQNGVAERRNRTLM+MVRSM+S +++P+SLW EALKTA+YILNRVPSKAVPKTPFEL
Sbjct: 968 TPQQNGVAERRNRTLMEMVRSMMSYSSVPISLWGEALKTAMYILNRVPSKAVPKTPFEL 1026