BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000016.1_g0030.1
(359 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010267684.1 PREDICTED: pentatricopeptide repeat-containing pr... 406 e-138
KMS96737.1 hypothetical protein BVRB_8g200420 [Beta vulgaris sub... 354 e-117
XP_010665556.1 PREDICTED: pentatricopeptide repeat-containing pr... 354 e-117
>XP_010267684.1 PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial [Nelumbo nucifera] XP_010267685.1
PREDICTED: pentatricopeptide repeat-containing protein
At1g61870, mitochondrial [Nelumbo nucifera]
XP_010267686.1 PREDICTED: pentatricopeptide
repeat-containing protein At1g61870, mitochondrial
[Nelumbo nucifera] XP_010267687.1 PREDICTED:
pentatricopeptide repeat-containing protein At1g61870,
mitochondrial [Nelumbo nucifera]
Length = 396
Score = 406 bits (1043), Expect = e-138, Method: Compositional matrix adjust.
Identities = 213/396 (53%), Positives = 279/396 (70%), Gaps = 39/396 (9%)
Query: 1 MAPLSRIRLNSFIKSRYFSSILHRDYSTQPT-KQKPQDLNSLIDSENEPEKILDICRTAF 59
MA SR+R+NS + R+FSSIL D +T T KQK + +L+ SE PE+I+DICR A
Sbjct: 1 MASFSRLRINSLLHRRHFSSILSPDSTTPLTSKQKSRAAIALLKSEKNPERIIDICRAAS 60
Query: 60 LNPNHHLDRTSFSNAMSKLKNYKSFHGIPSFLEELKSHPDLRNERFFSHVISLYGQSGLI 119
L P HLDR +FS A+SKL SF GI SFLEELK+ DL+NERF SH I LYGQ+G++
Sbjct: 61 LTPELHLDRIAFSIAISKLTESNSFEGIRSFLEELKTRSDLKNERFLSHAIVLYGQAGML 120
Query: 120 DHSIKTFQQMEEMGISRSTKTLNSLLLACVLAKKYDEVTRVFLEFPKLYNIKPDRDTYNT 179
DH+I+TF+QM+EMGI RSTK+LN+LL AC++AKK+DEV+R+FLEFP+ Y I PD DTYNT
Sbjct: 121 DHAIRTFKQMDEMGIPRSTKSLNALLFACIVAKKHDEVSRIFLEFPRAYGITPDIDTYNT 180
Query: 180 VIMGLCESGSSSSVYPILVEMGKNKCKPDTTTFRTILSGFFKEEKLNDVEKVLEIMEKQD 239
VI CESGSSSSVY IL EM + CKP+ T+F T+L+GF+KEEK DV +VLE+M+K D
Sbjct: 181 VIKSFCESGSSSSVYSILAEMSRKGCKPNATSFGTLLAGFYKEEKYEDVAEVLELMKKHD 240
Query: 240 LGNVVSIYNLKIKSLCRLSRSSEAKSLFEGMLSQGVKPTSKTYCHLITGFCEEGNLEEAK 299
+ VS YN++I+SLC++ +S EAK+LF+GML++G+KP + TY HLI GFC EG+LEEAK
Sbjct: 241 VHQGVSTYNIRIQSLCKMKKSPEAKALFDGMLARGMKPNTNTYFHLIYGFCNEGDLEEAK 300
Query: 300 RIFDIMPKKSC------------------------------------DHFPTLKMLVDGL 323
R+F M +K C +F T+K LV+GL
Sbjct: 301 RLFKDMSRKGCVPQSDCYFTLIYYLCQGGDFDTALQLCKDSLAKNWVPNFTTMKTLVNGL 360
Query: 324 LSASKVDEAREVIREIK-KFTKN-DAWEEIEKALPQ 357
S+SKV+EARE++ ++K +F KN + WEEIE+ LPQ
Sbjct: 361 ASSSKVEEARELVGQMKERFGKNANMWEEIEEGLPQ 396
>KMS96737.1 hypothetical protein BVRB_8g200420 [Beta vulgaris subsp. vulgaris]
Length = 400
Score = 354 bits (909), Expect = e-117, Method: Compositional matrix adjust.
Identities = 181/365 (49%), Positives = 239/365 (65%), Gaps = 38/365 (10%)
Query: 31 TKQKPQDLNSLIDSENEPEKILDICRTAFLNPNHHLDRTSFSNAMSKLKNYKSFHGIPSF 90
+KQK + SL+ SE PEKILDICR A L P HLDR FS A+SKL F GI F
Sbjct: 36 SKQKSRAALSLLKSEKNPEKILDICRAASLTPESHLDRICFSIAVSKLSESNYFEGIRVF 95
Query: 91 LEELKSHPDLRNERFFSHVISLYGQSGLIDHSIKTFQQMEEMGISRSTKTLNSLLLACVL 150
LEELK PDL+NERF SH I LYGQ+G+I ++I TF+QME++GI R+ K+LNSLL +C+L
Sbjct: 96 LEELKKRPDLQNERFVSHSIVLYGQAGMIQNAITTFEQMEQLGIQRTVKSLNSLLFSCIL 155
Query: 151 AKKYDEVTRVFLEFPKLYNIKPDRDTYNTVIMGLCESGSSSSVYPILVEMGKNKCKPDTT 210
AKK++EV R+F +FP YNI+PD DTYNTVI CE+G SSS Y ++ EMG+ CKP+TT
Sbjct: 156 AKKHNEVKRIFTDFPSTYNIEPDTDTYNTVIKAFCEAGESSSGYSVVSEMGRKNCKPNTT 215
Query: 211 TFRTILSGFFKEEKLNDVEKVLEIMEKQDLGNVVSIYNLKIKSLCRLSRSSEAKSLFEGM 270
TF +++GF+KE+K DV KVL +M++ + +S YN++I+SLC+L RS EAK+L +GM
Sbjct: 216 TFNNMIAGFYKEQKTEDVGKVLNLMKEHGITPGLSTYNIRIQSLCKLGRSFEAKALLDGM 275
Query: 271 LSQGVKPTSKTYCHLITGFCEEGNLEEAKRIFDIM------PKKSC-------------- 310
+G P S TY LI GFC EG LE+AK++F M P C
Sbjct: 276 REKGTHPNSTTYATLIHGFCREGKLEDAKKLFKTMVTQGGKPDTGCYFTLIYFLCQGGDY 335
Query: 311 ----------------DHFPTLKMLVDGLLSASKVDEAREVIREIK-KFTKN-DAWEEIE 352
+F T+K LV+GL+S +KV+EA+E++ +IK KF KN D W+E E
Sbjct: 336 ETALQISKECMEKNWVPNFTTMKSLVEGLVSIAKVEEAKELVAQIKEKFPKNADLWKETE 395
Query: 353 KALPQ 357
+ L Q
Sbjct: 396 EKLSQ 400
>XP_010665556.1 PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial [Beta vulgaris subsp. vulgaris]
Length = 422
Score = 354 bits (909), Expect = e-117, Method: Compositional matrix adjust.
Identities = 181/365 (49%), Positives = 239/365 (65%), Gaps = 38/365 (10%)
Query: 31 TKQKPQDLNSLIDSENEPEKILDICRTAFLNPNHHLDRTSFSNAMSKLKNYKSFHGIPSF 90
+KQK + SL+ SE PEKILDICR A L P HLDR FS A+SKL F GI F
Sbjct: 58 SKQKSRAALSLLKSEKNPEKILDICRAASLTPESHLDRICFSIAVSKLSESNYFEGIRVF 117
Query: 91 LEELKSHPDLRNERFFSHVISLYGQSGLIDHSIKTFQQMEEMGISRSTKTLNSLLLACVL 150
LEELK PDL+NERF SH I LYGQ+G+I ++I TF+QME++GI R+ K+LNSLL +C+L
Sbjct: 118 LEELKKRPDLQNERFVSHSIVLYGQAGMIQNAITTFEQMEQLGIQRTVKSLNSLLFSCIL 177
Query: 151 AKKYDEVTRVFLEFPKLYNIKPDRDTYNTVIMGLCESGSSSSVYPILVEMGKNKCKPDTT 210
AKK++EV R+F +FP YNI+PD DTYNTVI CE+G SSS Y ++ EMG+ CKP+TT
Sbjct: 178 AKKHNEVKRIFTDFPSTYNIEPDTDTYNTVIKAFCEAGESSSGYSVVSEMGRKNCKPNTT 237
Query: 211 TFRTILSGFFKEEKLNDVEKVLEIMEKQDLGNVVSIYNLKIKSLCRLSRSSEAKSLFEGM 270
TF +++GF+KE+K DV KVL +M++ + +S YN++I+SLC+L RS EAK+L +GM
Sbjct: 238 TFNNMIAGFYKEQKTEDVGKVLNLMKEHGITPGLSTYNIRIQSLCKLGRSFEAKALLDGM 297
Query: 271 LSQGVKPTSKTYCHLITGFCEEGNLEEAKRIFDIM------PKKSC-------------- 310
+G P S TY LI GFC EG LE+AK++F M P C
Sbjct: 298 REKGTHPNSTTYATLIHGFCREGKLEDAKKLFKTMVTQGGKPDTGCYFTLIYFLCQGGDY 357
Query: 311 ----------------DHFPTLKMLVDGLLSASKVDEAREVIREIK-KFTKN-DAWEEIE 352
+F T+K LV+GL+S +KV+EA+E++ +IK KF KN D W+E E
Sbjct: 358 ETALQISKECMEKNWVPNFTTMKSLVEGLVSIAKVEEAKELVAQIKEKFPKNADLWKETE 417
Query: 353 KALPQ 357
+ L Q
Sbjct: 418 EKLSQ 422