BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000016.1_g0040.1
(183 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_015898964.1 PREDICTED: protein LHCP TRANSLOCATION DEFECT [Ziz... 269 5e-90
XP_006452238.1 hypothetical protein CICLE_v10009689mg [Citrus cl... 263 8e-88
XP_004294361.1 PREDICTED: protein LHCP TRANSLOCATION DEFECT [Fra... 261 9e-87
>XP_015898964.1 PREDICTED: protein LHCP TRANSLOCATION DEFECT [Ziziphus jujuba]
Length = 174
Score = 269 bits (688), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 134/184 (72%), Positives = 151/184 (82%), Gaps = 12/184 (6%)
Query: 2 MASIPCSF--HLTLLPSSNSSSSSSSSSGLLVVQKCTSNSLFLGIRKNMGCFNSPKIGPS 59
MASIPC+ HL+ P S +S +S V K N+ FLGIRKN+GCF IGPS
Sbjct: 1 MASIPCTTATHLSFTPKSLTSLAS--------VPKF--NTQFLGIRKNLGCFRPSNIGPS 50
Query: 60 NGSRTKCWFKFGKNGVDAEGAGIYGSQRREDFDRDDVEQYFNYMGMLAVEGSYDKMDALL 119
NG R KCWFKFGKNGVDAEGAGIYGSQ R+DFDRDDVEQYFNYMGMLAVEGSYDKM+ALL
Sbjct: 51 NGYRAKCWFKFGKNGVDAEGAGIYGSQSRDDFDRDDVEQYFNYMGMLAVEGSYDKMEALL 110
Query: 120 NQNIHPVDILLLMAATEGDKPKIEELMRAGADYTVKDADGRTALDRAASNEIKEFIVGFS 179
+ NIHPVDILL+MAA+EGDKPKIEEL+RAGA+Y VKDADGRTA+DRAA++EIK FI+ FS
Sbjct: 111 SLNIHPVDILLMMAASEGDKPKIEELLRAGANYDVKDADGRTAIDRAANDEIKNFILNFS 170
Query: 180 VQKA 183
QKA
Sbjct: 171 AQKA 174
>XP_006452238.1 hypothetical protein CICLE_v10009689mg [Citrus clementina]
XP_006493957.1 PREDICTED: protein LHCP TRANSLOCATION
DEFECT [Citrus sinensis] ESR65478.1 hypothetical protein
CICLE_v10009689mg [Citrus clementina] KDO50277.1
hypothetical protein CISIN_1g030701mg [Citrus sinensis]
Length = 173
Score = 263 bits (673), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 129/186 (69%), Positives = 148/186 (79%), Gaps = 17/186 (9%)
Query: 2 MASIPC---SFHLTLLPSSNSSSSSSSSSGLLVVQKCTS-NSLFLGIRKNMGCFNSPKIG 57
MASIPC S H PS++ SS CT +S FLG + N+ CF +IG
Sbjct: 1 MASIPCITASIHFVSKPSNSQSS-------------CTKFSSQFLGTKNNLKCFRPSRIG 47
Query: 58 PSNGSRTKCWFKFGKNGVDAEGAGIYGSQRREDFDRDDVEQYFNYMGMLAVEGSYDKMDA 117
PSNGSR +CWFKFGKNGVDAE AGIYGSQ+R+DFDRDDVEQYFNYMGMLAVEG+YDKM+A
Sbjct: 48 PSNGSRAQCWFKFGKNGVDAENAGIYGSQKRDDFDRDDVEQYFNYMGMLAVEGTYDKMEA 107
Query: 118 LLNQNIHPVDILLLMAATEGDKPKIEELMRAGADYTVKDADGRTALDRAASNEIKEFIVG 177
LL+QNIHPVDILL++AA+EGDKPKIEEL+RAGA YTVKDADGRTAL+RA S EIK+ I+
Sbjct: 108 LLSQNIHPVDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAPSEEIKDLILN 167
Query: 178 FSVQKA 183
FSVQKA
Sbjct: 168 FSVQKA 173
>XP_004294361.1 PREDICTED: protein LHCP TRANSLOCATION DEFECT [Fragaria vesca subsp.
vesca]
Length = 175
Score = 261 bits (666), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 132/183 (72%), Positives = 150/183 (81%), Gaps = 9/183 (4%)
Query: 2 MASIPCSFHLTL-LPSSNSSSSSSSSSGLLVVQKCTSNSLFLGIRKNMGCFNSPKIGPSN 60
MASIPC+ T +SNS +S +SS L N+ FLG R +G +GPSN
Sbjct: 1 MASIPCTTAPTHSCFASNSFNSPTSSVKL--------NTRFLGTRNRLGWVRPFGLGPSN 52
Query: 61 GSRTKCWFKFGKNGVDAEGAGIYGSQRREDFDRDDVEQYFNYMGMLAVEGSYDKMDALLN 120
GSR KCWFKFGKNGVDAEGAGIYGSQ R+DFD+DDVEQYFNYMGMLAVEG+YDKM+ALL+
Sbjct: 53 GSRAKCWFKFGKNGVDAEGAGIYGSQSRDDFDKDDVEQYFNYMGMLAVEGTYDKMNALLS 112
Query: 121 QNIHPVDILLLMAATEGDKPKIEELMRAGADYTVKDADGRTALDRAASNEIKEFIVGFSV 180
QNIHPVDILLLMAA+EGDKPKIEEL+RAGA Y VKDADGRTALDRAA++EIK+FI+GFSV
Sbjct: 113 QNIHPVDILLLMAASEGDKPKIEELLRAGASYNVKDADGRTALDRAANDEIKDFILGFSV 172
Query: 181 QKA 183
QKA
Sbjct: 173 QKA 175