BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g0320.1
(265 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
JAT57914.1 Retrovirus-related Pol polyprotein from transposon TN... 174 1e-47
XP_010692517.1 PREDICTED: uncharacterized protein LOC104905624 [... 170 2e-44
KYP71220.1 Retrovirus-related Pol polyprotein from transposon TN... 167 3e-44
>JAT57914.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Anthurium amnicola]
Length = 529
Score = 174 bits (442), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/165 (53%), Positives = 115/165 (69%), Gaps = 14/165 (8%)
Query: 100 PELTKKPAEVAVIEEDDRSVLEIIEECDEAMVLAINTCFAEDRWILDTGCTFHVCPHKEW 159
PE K AEV V ++ EC E VL++N + D WILD+G ++H+CP+K+
Sbjct: 256 PE---KAAEVGVAKD----------EC-EDYVLSVNAVRSNDEWILDSGYSYHMCPYKDR 301
Query: 160 FSTYTVINGGKVLMGNDAPYKVVGIGTIQIKMNDVVVRTITNIRHVPDLKRNLISLGTLD 219
F TY +GG VLMGN+AP K +GIG+I+IKM D +VRT+T +RHV DLK+NLISLGTL+
Sbjct: 302 FHTYEHDDGGVVLMGNNAPRKTIGIGSIRIKMYDGIVRTLTQVRHVLDLKKNLISLGTLE 361
Query: 220 DNGCKYVGEGGVLRVSKGSLTVMKGLKKNGLYVLQGNTVTGSVAV 264
NGCKY EGGVLRVS+G+L +MK + N LY L G TVTG+ A
Sbjct: 362 ANGCKYSAEGGVLRVSRGALILMKVKRTNSLYTLIGTTVTGAAAA 406
Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 57/86 (66%)
Query: 3 KYEIEKFDGTNDFNLWKIKMPAVLVQQGLLKTLNGKDALVESLLEAEKEDLMERAHGQIL 62
K+EIEKFD F +W++KM A+L QQGL K L G + + +L + EK+D+ ERA I
Sbjct: 4 KFEIEKFDRNISFGIWQVKMRAILTQQGLQKALLGIEKMSSTLSQEEKQDMDERALAVIQ 63
Query: 63 LFLSNEDLQEVATETTADGLWSKLET 88
L LSNE L+EV E +A LW KLE+
Sbjct: 64 LCLSNEVLREVIHEKSAAALWLKLES 89
>XP_010692517.1 PREDICTED: uncharacterized protein LOC104905624 [Beta vulgaris
subsp. vulgaris]
Length = 2676
Score = 170 bits (431), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 74/127 (58%), Positives = 101/127 (79%)
Query: 139 AEDRWILDTGCTFHVCPHKEWFSTYTVINGGKVLMGNDAPYKVVGIGTIQIKMNDVVVRT 198
++ WI+D+GC+FHV P+K+ F++Y NGG V MGN+A KVVGIG++ I M D VRT
Sbjct: 288 SKSEWIMDSGCSFHVTPYKDMFTSYEEFNGGTVTMGNNATCKVVGIGSVDITMFDGTVRT 347
Query: 199 ITNIRHVPDLKRNLISLGTLDDNGCKYVGEGGVLRVSKGSLTVMKGLKKNGLYVLQGNTV 258
++ +RHVP++K+NLISLGTLD+NGCKY+ EGGVL V +G+L +MKG+K+ LYVLQG+ V
Sbjct: 348 LSKVRHVPEMKKNLISLGTLDNNGCKYIAEGGVLNVIRGALVLMKGIKRGSLYVLQGSMV 407
Query: 259 TGSVAVS 265
+GS VS
Sbjct: 408 SGSANVS 414
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 57/86 (66%)
Query: 3 KYEIEKFDGTNDFNLWKIKMPAVLVQQGLLKTLNGKDALVESLLEAEKEDLMERAHGQIL 62
K +IEKFD + +F LW++KM A+L+Q G+ K L GK ++ E + E+L +A I
Sbjct: 2 KLDIEKFDRSINFGLWQVKMKALLIQNGVHKALEGKVKKPTTMTEEKWEELDLKALLAIQ 61
Query: 63 LFLSNEDLQEVATETTADGLWSKLET 88
L LSNE L+EVA E ++ GLW KLE+
Sbjct: 62 LCLSNEVLREVAKEDSSAGLWLKLES 87
>KYP71220.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 690
Score = 167 bits (424), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 112/165 (67%), Gaps = 9/165 (5%)
Query: 101 ELTKKPAEVAVIEEDDRSVLEIIEECDEAMVLAINTCFAEDRWILDTGCTFHVCPHKEWF 160
E K PAE A +E D + I D+ ++ WILD+GCTFH+CP+K+ F
Sbjct: 254 EKGKNPAEAANVETDSDGDVMISVSSDKR---------SKTEWILDSGCTFHMCPYKDLF 304
Query: 161 STYTVINGGKVLMGNDAPYKVVGIGTIQIKMNDVVVRTITNIRHVPDLKRNLISLGTLDD 220
+T ++ G VLMGND K+ GIGTIQIK +D ++T++N+R +PDLKRNLISLGTL+
Sbjct: 305 TTLEPVDSGVVLMGNDTQCKIAGIGTIQIKTHDGTIKTLSNVRFIPDLKRNLISLGTLES 364
Query: 221 NGCKYVGEGGVLRVSKGSLTVMKGLKKNGLYVLQGNTVTGSVAVS 265
GCKY EGGVL+VSKG++ ++K + LY+LQG+ VTGS AVS
Sbjct: 365 LGCKYSAEGGVLKVSKGAIVLLKANRIGSLYILQGSIVTGSAAVS 409
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 59/88 (67%)
Query: 1 MAKYEIEKFDGTNDFNLWKIKMPAVLVQQGLLKTLNGKDALVESLLEAEKEDLMERAHGQ 60
+ K++IEKFDG F++WK++M AVL Q GL K L+GK ++ + + ++L E+A
Sbjct: 4 VTKFDIEKFDGKICFSIWKVQMKAVLTQNGLKKALDGKAKKPVNMTDEQWDELDEKALSA 63
Query: 61 ILLFLSNEDLQEVATETTADGLWSKLET 88
I L LS E L+EVA ETTA LW KLE+
Sbjct: 64 IQLCLSKEVLREVANETTAAALWLKLES 91