BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g0340.1
(372 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP57305.1 Retrovirus-related Pol polyprotein from transposon TN... 363 e-119
KYP48513.1 Retrovirus-related Pol polyprotein from transposon TN... 367 e-115
AAT44282.1 putative polyprotein [Oryza sativa Japonica Group] 361 e-111
>KYP57305.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 530
Score = 363 bits (931), Expect = e-119, Method: Compositional matrix adjust.
Identities = 196/398 (49%), Positives = 263/398 (66%), Gaps = 51/398 (12%)
Query: 16 GKQVEQGDHAEQVEFEID--TPEEVQPQVDEQAEEDEPELVHYSVARNRGRRDIRAPKRY 73
K +G H ++VEFE++ E + P ++EP+ S+A R RR+IR P RY
Sbjct: 112 NKSTNKGVH-QKVEFEVEDSNKENLNPVEQSSNVQEEPQ----SIATRRTRREIRKPTRY 166
Query: 74 RMADM--------VAFALSVGESIDGGEPCTYEEAMRSDDSRQWSLAMNEEIESLRKNQF 125
AD+ VA+AL VGE++D EP +Y+EA++S ++ +W +AM+EE++SL+KNQ
Sbjct: 167 --ADVTNVVDTNSVAYALLVGENLDSDEPKSYKEAIQSKEASKWLIAMDEEMQSLKKNQT 224
Query: 126 WELAEHPKGQKIVCSKRVFEKKEGIPRVEDARYKAQLVAKGFTQREGIDFNEVFSLVVKH 185
WEL P+G K V K V ++KEGIP VE +R+KA+LVAKGF+Q+EGID++EVFS VVKH
Sbjct: 225 WELVPLPRGVKPVGCKWVLKRKEGIPGVEPSRFKARLVAKGFSQKEGIDYHEVFSPVVKH 284
Query: 186 SSIRVILALIALYDMELEQLDVKTAFLHGELEEQIYMRQPEGFEILEKEDQVCLLKKSLY 245
+IRV+LA+++ DM+LEQL+VK AFLHG LEEQ+YM QP+GF + K++ VCLLKKSLY
Sbjct: 285 KTIRVLLAMVSALDMKLEQLNVKIAFLHGNLEEQVYMSQPDGFLEVGKKNHVCLLKKSLY 344
Query: 246 GLKQSPRQ--------------------------KLSDGSYVYLLLYVDDMLIACKDMSE 279
GLKQSPRQ KLSDGSY+YLLLYVDDMLIA K ++
Sbjct: 345 GLKQSPRQWYKRFDAFMISYNFVRNEFDNCVYSRKLSDGSYIYLLLYVDDMLIAAKSKTD 404
Query: 280 IHMLKDQLKGEFEMKDLDASRKILSMKIQRDISVGKRFLSQKTYIEKVLECFGMTEAKPI 339
I LK L EFEMKDL ++KIL M+I RD + G ++SQK YIEK+L+ F M +KP+
Sbjct: 405 IDALKAMLSSEFEMKDLGTAKKILGMEIWRDRNAGLLYVSQKKYIEKLLQSFQMENSKPV 464
Query: 340 STPLAAHFKISGELSPTTVTRR--------STCLGCLM 369
STPLA HFK+ P+T + S+ +G LM
Sbjct: 465 STPLATHFKLDASTLPSTNEEKEYMNTVPYSSAVGSLM 502
>KYP48513.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1032
Score = 367 bits (942), Expect = e-115, Method: Compositional matrix adjust.
Identities = 193/373 (51%), Positives = 251/373 (67%), Gaps = 43/373 (11%)
Query: 25 AEQVEFEIDTPEEVQPQVD-----------EQAEEDEP--ELVHYSVARNRGRRDIRAPK 71
+E+VE E+ + V P VD + +D P + Y++AR+R RR I+ P
Sbjct: 431 SEKVELEL---KSVAPNVDVPSSSTTESSIDDHGDDHPIQQQEEYNIARDRTRRQIKLPA 487
Query: 72 RYRMADMVAFALSVGESI-DGGEPCTYEEAMRSDDSRQWSLAMNEEIESLRKNQFWELAE 130
RY ++ A+ALS+ + + D EP +Y EA+ DS +W +AMNEEIESL KN W L +
Sbjct: 488 RYTDDNLTAYALSIAQEVNDDVEPASYSEAVSCVDSAKWLVAMNEEIESLHKNNTWNLTK 547
Query: 131 HPKGQKIVCSKRVFEKKEGIPRVEDARYKAQLVAKGFTQREGIDFNEVFSLVVKHSSIRV 190
PKG++ + K +++KK+GIP VED R KA+LV KGF Q+EGIDFNE+FS VV+H+SIR+
Sbjct: 548 LPKGKRPLRCKWIYKKKDGIPGVEDPRCKARLVVKGFYQKEGIDFNEIFSPVVRHTSIRI 607
Query: 191 ILALIALYDMELEQLDVKTAFLHGELEEQIYMRQPEGFEILEKEDQVCLLKKSLYGLKQS 250
+LA +AL+D+ELEQLDVKTAFLHGELEE+IYM QPEGF + KE VC LKKSLYGLKQ+
Sbjct: 608 LLAFVALFDLELEQLDVKTAFLHGELEEEIYMDQPEGFVVPSKEHLVCQLKKSLYGLKQA 667
Query: 251 PR--------------------------QKLSDGSYVYLLLYVDDMLIACKDMSEIHMLK 284
PR Q+ DG+++YLLLYVDDMLIA +D S I LK
Sbjct: 668 PRQWYKKFDSFMIGQGYSRSKYDDCIYFQQFPDGTFIYLLLYVDDMLIASRDKSLISKLK 727
Query: 285 DQLKGEFEMKDLDASRKILSMKIQRDISVGKRFLSQKTYIEKVLECFGMTEAKPISTPLA 344
QL EFEMK+L A++KIL M+I RD VGK FLSQ+ YIE++L+ F M KP+STPLA
Sbjct: 728 AQLNNEFEMKELGAAKKILGMEIHRDRQVGKLFLSQQKYIERLLDRFNMNNCKPVSTPLA 787
Query: 345 AHFKISGELSPTT 357
AHFK+S +L P T
Sbjct: 788 AHFKLSSDLCPQT 800
>AAT44282.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 361 bits (926), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/387 (51%), Positives = 260/387 (67%), Gaps = 46/387 (11%)
Query: 8 PVDAREGVGKQVEQ---GDHAEQVEFEIDTPEEVQPQVDEQA---EEDEPELVH----YS 57
PV+++E QVE HA PE+ +++ A E+ + +VH S
Sbjct: 699 PVESQEKASVQVEHLISSGHA---------PEKEDVAINQDAPVIEDSDSSIVHQSPKRS 749
Query: 58 VARNRGRRDIRAPKRY-RMADMVAFALSVGESIDG-GEPCTYEEAMRSDDSRQWSLAMNE 115
+A+++ +R+I+ P+RY A +VA+ALSV E I+G EP TY EA+ SDD +W AM++
Sbjct: 750 IAKDKPKRNIKPPRRYIEEAKIVAYALSVAEKIEGNAEPSTYSEAIVSDDCNRWITAMHD 809
Query: 116 EIESLRKNQFWELAEHPKGQKIVCSKRVFEKKEGIPRVEDARYKAQLVAKGFTQREGIDF 175
E+ESL KN WEL + PK +K + K +F++KEG+ ++ARYKA+LVAKG++Q GIDF
Sbjct: 810 EMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDF 869
Query: 176 NEVFSLVVKHSSIRVILALIALYDMELEQLDVKTAFLHGELEEQIYMRQPEGFEILEKED 235
N+VFS VVKHSSIR +L ++A++D ELEQ++VKTAFLHGELEE IYM QPEGF + KE+
Sbjct: 870 NDVFSPVVKHSSIRTLLGIVAMHDYELEQMNVKTAFLHGELEEDIYMEQPEGFVVPGKEN 929
Query: 236 QVCLLKKSLYGLKQSPRQ-------------------------KLSDGSYVYLLLYVDDM 270
VC LKKSLYGLKQSPRQ K+ DGS +YLLLYVDDM
Sbjct: 930 LVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRISNYDSCVYLKVVDGSVIYLLLYVDDM 989
Query: 271 LIACKDMSEIHMLKDQLKGEFEMKDLDASRKILSMKIQRDISVGKRFLSQKTYIEKVLEC 330
LIA KD SEI LK QL EFEMKDL A++KIL M+I R+ GK +LSQK YIEKVL
Sbjct: 990 LIAAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRR 1049
Query: 331 FGMTEAKPISTPLAAHFKISGELSPTT 357
F M +AKP+STPLAAHF++S +L P +
Sbjct: 1050 FNMHDAKPVSTPLAAHFRLSSDLCPLS 1076