BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g0370.1
(369 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAN82380.1 hypothetical protein VITISV_021579 [Vitis vinifera] 215 1e-59
ABA98049.1 retrotransposon protein, putative, Ty1-copia subclass... 216 4e-59
CAN67247.1 hypothetical protein VITISV_008682 [Vitis vinifera] 213 5e-58
>CAN82380.1 hypothetical protein VITISV_021579 [Vitis vinifera]
Length = 828
Score = 215 bits (548), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 102/178 (57%), Positives = 130/178 (73%), Gaps = 2/178 (1%)
Query: 1 MVENQFSKSIQNFQTDGGGEYISNEFSDFLTQNGIIHRRTCPHTPQQNGVAERKIRHLVE 60
M+ENQ +I+ Q+D GGE+++ F +L +GI+H+ +CPHTPQQNG AERKIRHLVE
Sbjct: 494 MIENQLHTTIKCIQSDNGGEFLA--FKPYLEAHGILHQFSCPHTPQQNGRAERKIRHLVE 551
Query: 61 TTLCLLHQSSAPLKFWPDAFQTSIFTINQLPSSVLKGISPFEKLFHKKPNYNFLRSFGCL 120
T L L+ QS P K+W AFQT+++ IN LP+ +L SP + LFHK PNY+ LR FGCL
Sbjct: 552 TGLALMAQSFLPSKYWTYAFQTAVYLINLLPAKLLHFQSPIQALFHKLPNYHHLRVFGCL 611
Query: 121 CFPLLTAYRSSKLDFKSKLCVFLGYSINHNGYRCLDINSSRIYISRNVIFDEFQFPFR 178
CFP L Y KL ++S CVFLGY+ HNGY CLD+++SRIYISRNVIF E FPF+
Sbjct: 612 CFPSLRPYTQHKLCYRSTACVFLGYAPAHNGYLCLDVSTSRIYISRNVIFHESYFPFQ 669
>ABA98049.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 216 bits (551), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 138/377 (36%), Positives = 187/377 (49%), Gaps = 37/377 (9%)
Query: 1 MVENQFSKSIQNFQTDGGGEYISNEFSDFLTQNGIIHRRTCPHTPQQNGVAERKIRHLVE 60
MVE QF + I QTD GGEY S + F ++ GI+H +CPHT QQNG AERK RH+VE
Sbjct: 562 MVERQFDRKILAMQTDWGGEYQS--LNSFFSKIGIVHHVSCPHTHQQNGSAERKHRHIVE 619
Query: 61 TTLCLLHQSSAPLKFWPDAFQTSIFTINQLPSSVLKGISPFEKLFHKKPNYNFLRSFGCL 120
L LL +S PLKFW +AFQ + + IN++PS V+ ISP EKLF +KP+Y+ LR FGC
Sbjct: 620 IGLSLLSHASMPLKFWDEAFQVATYLINRVPSRVIHNISPLEKLFKQKPDYSSLRIFGCA 679
Query: 121 CFPLLTAYRSSKLDFKSKLCVFLGYSINHNGYRCLDINSSRIYISRNVIFDEFQFPFRLS 180
C+P L Y + KL F+SK CVFLG+S H G++CL++++ RIYISR+V+FDE FPF
Sbjct: 680 CWPNLRPYNNHKLQFRSKRCVFLGFSTMHKGFKCLEVSTGRIYISRDVVFDENIFPF--- 736
Query: 181 SSSPNSNFPPFQNPNFPPLSLTWSVPLRDFG------PAGPPVPCFIRPPTHQIVRSTHL 234
+ ++N L+ P+R G P P+ + H
Sbjct: 737 -TELHANAGARLRSEIDILTPELLGPIRSVGNEQCMHPVNNPLSADVSAALSNRANEPHR 795
Query: 235 -GDLHP--------------SSNPTVPQGGQYHSPSPT----HTPPTPQPDSHSAHSDVH 275
G +HP SS P P +HSP+ T H PTP A S +
Sbjct: 796 DGAVHPADAEDPPATPPLDASSGPE-PDRVVHHSPAATSSGRHPGPTPGSVPRGAASSLA 854
Query: 276 LDTNPSIVVQSALSEPITNALNHPSSSPTNSIPNNQTSSSPVILHPPSTSLPSKTSSTTS 335
+T V Q+ + SSP T + + H T S+ +
Sbjct: 855 EETAEDSVSQAVQEQESQVVQEQEQSSPAQEHAQAVTDETNTLQHADVTDTGSEAPAGPR 914
Query: 336 THSMITRTKDGTRKPSL 352
TR + G RK +
Sbjct: 915 -----TRLQSGVRKEKV 926
>CAN67247.1 hypothetical protein VITISV_008682 [Vitis vinifera]
Length = 1270
Score = 213 bits (542), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 130/178 (73%), Gaps = 2/178 (1%)
Query: 1 MVENQFSKSIQNFQTDGGGEYISNEFSDFLTQNGIIHRRTCPHTPQQNGVAERKIRHLVE 60
M+ENQ + +I+ Q+D GGE+I+ F +L +GI+H+ +CPHTPQQNG A+RKIRHLVE
Sbjct: 483 MIENQLNSTIKCIQSDNGGEFIA--FKPYLEAHGIVHQFSCPHTPQQNGRAKRKIRHLVE 540
Query: 61 TTLCLLHQSSAPLKFWPDAFQTSIFTINQLPSSVLKGISPFEKLFHKKPNYNFLRSFGCL 120
T + LL QS P K+W AFQTS++ IN LP+ +L SP + LFHK PNY+ LR FGCL
Sbjct: 541 TGMALLAQSFLPSKYWSFAFQTSVYLINLLPTKLLNFQSPLQVLFHKIPNYHHLRVFGCL 600
Query: 121 CFPLLTAYRSSKLDFKSKLCVFLGYSINHNGYRCLDINSSRIYISRNVIFDEFQFPFR 178
CFP L Y KL ++S CVFLGY+ H GY CLD+++SR+YISR+V+F E FPF+
Sbjct: 601 CFPSLRPYNHHKLSYRSTACVFLGYASAHKGYICLDVSTSRLYISRDVLFHESSFPFQ 658