BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g0420.1
(211 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_007028624.1 Uncharacterized protein TCM_024518 [Theobroma cac... 157 4e-44
XP_007038204.1 Transducin/WD40 repeat-like superfamily protein [... 160 5e-42
KHN13665.1 Retrovirus-related Pol polyprotein from transposon TN... 137 6e-36
>XP_007028624.1 Uncharacterized protein TCM_024518 [Theobroma cacao] EOY09126.1
Uncharacterized protein TCM_024518 [Theobroma cacao]
Length = 277
Score = 157 bits (397), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 82/182 (45%), Positives = 122/182 (67%), Gaps = 12/182 (6%)
Query: 1 MLCLERDVAFLVDGETTAASVWLKLESNFMTKTLTNRVYLKSKLFLCRMEEGSSIQKYVN 60
+L L +V V E +AA++W KLES ++TK+LTNR+Y+K +L+ +M EG+S+ +++
Sbjct: 66 LLTLSDEVLREVTDEESAAAMWFKLESIYITKSLTNRLYMKQRLYTLKMSEGTSVNTHID 125
Query: 61 RFDSIISDLKDIDVKVEDEDQALILLLSLPKSYENLVQTLMLVGDSLSLEKMRNSLLTDD 120
F+ +I DLK+IDVK+EDED ALILL LP SYEN V T++ D+L+ E +R L + +
Sbjct: 126 EFNRVILDLKNIDVKIEDEDLALILLCYLPPSYENFVDTMLYGRDTLTFEDVRAYLNSKE 185
Query: 121 LRKVATSGMTSGGV-DKDQAQGLFATRGRSNERGKRKGGKSRSKSRGSFKKTCFSCGELS 179
L+K GG+ +++QA+GL RGR E+G K GKSR+K KTC++CG+
Sbjct: 186 LKKKV------GGIRNENQAEGLVVNRGRGKEKGLDKKGKSRAKG-----KTCWNCGQKG 234
Query: 180 HF 181
HF
Sbjct: 235 HF 236
>XP_007038204.1 Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
EOY22705.1 Transducin/WD40 repeat-like superfamily
protein [Theobroma cacao]
Length = 1029
Score = 160 bits (405), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 84/182 (46%), Positives = 122/182 (67%), Gaps = 12/182 (6%)
Query: 1 MLCLERDVAFLVDGETTAASVWLKLESNFMTKTLTNRVYLKSKLFLCRMEEGSSIQKYVN 60
+L L +V V E +AA+VW KLES +MTK+LTNR+Y+K +L+ +M EG+S+ +++
Sbjct: 188 LLALSDEVLREVTDEESAAAVWFKLESIYMTKSLTNRLYMKQRLYTLKMSEGTSVNTHID 247
Query: 61 RFDSIISDLKDIDVKVEDEDQALILLLSLPKSYENLVQTLMLVGDSLSLEKMRNSLLTDD 120
F+ +I DLK+IDVK+EDED ALILL LP SYEN V T++ D+L+ E +R SL +
Sbjct: 248 EFNRVILDLKNIDVKIEDEDLALILLCYLPPSYENFVDTMLYGRDTLTFEDVRASLNFKE 307
Query: 121 LRKVATSGMTSGGV-DKDQAQGLFATRGRSNERGKRKGGKSRSKSRGSFKKTCFSCGELS 179
L+K GG+ +++QA+GL RGR E+G + GKSR+K KTC++CG+
Sbjct: 308 LKKKV------GGIRNENQAEGLVVNRGRGKEKGLDRKGKSRAKG-----KTCWNCGQKG 356
Query: 180 HF 181
HF
Sbjct: 357 HF 358
>KHN13665.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 337
Score = 137 bits (346), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 77/181 (42%), Positives = 118/181 (65%), Gaps = 7/181 (3%)
Query: 1 MLCLERDVAFLVDGETTAASVWLKLESNFMTKTLTNRVYLKSKLFLCRMEEGSSIQKYVN 60
+L L +V V E +AA +WLKLES +MTK+LTN++YLK +L +MEEGSSI+++V+
Sbjct: 63 ILSLGDEVLREVAEEKSAAGIWLKLESLYMTKSLTNKLYLKKRLHQLKMEEGSSIKEHVS 122
Query: 61 RFDSIISDLKDIDVKVEDEDQALILLLSLPKSYENLVQTLMLVGDSLSLEKMRNSLLTDD 120
F + DLK +DV++++EDQA++LL SLP S+ENLV T++ D+L+LE+++ +L + +
Sbjct: 123 LFTKAVLDLKSVDVRIDEEDQAVMLLCSLPSSFENLVDTMLFGRDTLTLEEVKATLNSRE 182
Query: 121 LRKVATSGMTSGGVDKDQAQGLFATRGRSNERGKRKGGKSRSKSRGSFKKTCFSCGELSH 180
L+K T GG + L A RGR +R + K RSK + +K C+ C + H
Sbjct: 183 LKKKITENKGEGG----DPEALMA-RGRLEKRDSKSKNKRRSKYKN--EKACYYCKKEGH 235
Query: 181 F 181
F
Sbjct: 236 F 236