BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g0450.1
(351 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP42039.1 Retrovirus-related Pol polyprotein from transposon TN... 417 e-142
KYP53356.1 Retrovirus-related Pol polyprotein from transposon TN... 417 e-141
JAT65344.1 Retrovirus-related Pol polyprotein from transposon TN... 410 e-140
>KYP42039.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 394
Score = 417 bits (1073), Expect = e-142, Method: Compositional matrix adjust.
Identities = 201/351 (57%), Positives = 255/351 (72%), Gaps = 3/351 (0%)
Query: 1 MLKYGFRRSDYDCYVYIKKLREGDFIYLLFYVDDMLIASRSMVEIDKLKSQLSQEFEMKE 60
M+ G+ RS YD +Y ++ +G FIYLL YVDDMLIASR I KLK+QL+ EFEMKE
Sbjct: 41 MIGQGYSRSKYDDCIYFQQFPDGTFIYLLLYVDDMLIASRDKSLISKLKAQLNNEFEMKE 100
Query: 61 MGAAKKIVGMEIKRERSSKKLYLSHKAYIERVVSRFGMQNAKAVSTPLAPQLSLSGRQSP 120
+GAAKKI+GMEI R+R KL+LS + YIER++ RF M N K VSTPLA LS P
Sbjct: 101 LGAAKKILGMEIHRDRQVGKLFLSQQKYIERLLDRFNMNNCKPVSTPLAAHFKLSSDLCP 160
Query: 121 TTTVEKDHMDRVPYASAVGSFMYVMVFTRPDISQAVSVVSRFMTNPGKTHWEAVKWVLRY 180
T E + M VPYASAVGS MY MV TRPD++ AVS+VSR+M NPGK HW AVKW+ RY
Sbjct: 161 QTKEEMERMSHVPYASAVGSLMYAMVCTRPDLAYAVSMVSRYMHNPGKDHWSAVKWIFRY 220
Query: 181 LKGIVDTGLCFGGD---TCQVSGYVDSDYAGDLDRTRSTTGYVFRVHGAPVSWRSTLQST 237
LKG + GL F + T V+G+VDSDY GDLDR RS +GY+F + + +SW+++LQS
Sbjct: 221 LKGTSNIGLVFDRNKATTNNVAGFVDSDYGGDLDRRRSLSGYIFTLCNSAISWKASLQSI 280
Query: 238 VALSTTKAEYMAMAVGVKEALWLWGFLDDLGIKQECVDVWCDSQSAIHLAKNQVHHARTK 297
ALSTT+AEY++ GVKEALW+ G + +LG+ Q+ + V+CDSQSAIHL KN +H +TK
Sbjct: 281 AALSTTEAEYVSATEGVKEALWIRGLVKELGLTQDVLTVFCDSQSAIHLTKNSRYHDKTK 340
Query: 298 HIDVIYHFVRDAIEEGDVSLMKVHTDENPADMLTKVVTCSQFQHCLELLQI 348
HIDV +HF+RD + G+V L KVHT ENPADMLTK + ++FQHCL L+ +
Sbjct: 341 HIDVKHHFIRDIVTIGEVLLQKVHTSENPADMLTKPLPNAKFQHCLGLVGL 391
>KYP53356.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 503
Score = 417 bits (1072), Expect = e-141, Method: Compositional matrix adjust.
Identities = 201/351 (57%), Positives = 255/351 (72%), Gaps = 3/351 (0%)
Query: 1 MLKYGFRRSDYDCYVYIKKLREGDFIYLLFYVDDMLIASRSMVEIDKLKSQLSQEFEMKE 60
M+ G+ RS YD +Y ++ +G FIYLL YVDDMLIASR I KLK+QL+ EFEMKE
Sbjct: 150 MIGQGYSRSKYDDCIYFQQFPDGTFIYLLLYVDDMLIASRDKSLISKLKAQLNNEFEMKE 209
Query: 61 MGAAKKIVGMEIKRERSSKKLYLSHKAYIERVVSRFGMQNAKAVSTPLAPQLSLSGRQSP 120
+GAAKKI+GMEI R+R KL+LS + YIER++ RF M N K VSTPLA LS P
Sbjct: 210 LGAAKKILGMEIHRDRQVGKLFLSQQKYIERLLDRFNMNNCKPVSTPLAAHFKLSSDLCP 269
Query: 121 TTTVEKDHMDRVPYASAVGSFMYVMVFTRPDISQAVSVVSRFMTNPGKTHWEAVKWVLRY 180
T E + M VPYASAVGS MY MV TRPD++ AVS+VSR+M NPGK HW AVKW+ RY
Sbjct: 270 QTKEEMERMSHVPYASAVGSLMYAMVCTRPDLAYAVSMVSRYMHNPGKDHWSAVKWIFRY 329
Query: 181 LKGIVDTGLCFGGD---TCQVSGYVDSDYAGDLDRTRSTTGYVFRVHGAPVSWRSTLQST 237
LKG + GL F + T V+G+VDSDY GDLDR RS +GY+F + + +SW+++LQS
Sbjct: 330 LKGTSNIGLVFDRNKATTNNVAGFVDSDYGGDLDRRRSLSGYIFTLCNSAISWKASLQSI 389
Query: 238 VALSTTKAEYMAMAVGVKEALWLWGFLDDLGIKQECVDVWCDSQSAIHLAKNQVHHARTK 297
ALSTT+AEY++ GVKEALW+ G + +LG+ Q+ + V+CDSQSAIHL KN +H +TK
Sbjct: 390 AALSTTEAEYVSATEGVKEALWIRGLVKELGLTQDVLTVFCDSQSAIHLTKNSRYHDKTK 449
Query: 298 HIDVIYHFVRDAIEEGDVSLMKVHTDENPADMLTKVVTCSQFQHCLELLQI 348
HIDV +HF+RD + G+V L KVHT ENPADMLTK + ++FQHCL L+ +
Sbjct: 450 HIDVKHHFIRDIVTIGEVLLQKVHTSENPADMLTKPLPNAKFQHCLGLVGL 500
>JAT65344.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Anthurium amnicola]
Length = 346
Score = 410 bits (1053), Expect = e-140, Method: Compositional matrix adjust.
Identities = 197/329 (59%), Positives = 248/329 (75%)
Query: 15 VYIKKLREGDFIYLLFYVDDMLIASRSMVEIDKLKSQLSQEFEMKEMGAAKKIVGMEIKR 74
+Y KKL FIYLL YVDDMLIA+ + EI++LK+ LS EFEMK++GAAKKI+GMEI+R
Sbjct: 11 IYFKKLSSNSFIYLLLYVDDMLIAAADIYEINQLKALLSSEFEMKDLGAAKKILGMEIQR 70
Query: 75 ERSSKKLYLSHKAYIERVVSRFGMQNAKAVSTPLAPQLSLSGRQSPTTTVEKDHMDRVPY 134
R + KL+L+ Y+++V+ RF M +AK VSTPLA LS SP +T E+ +M RVPY
Sbjct: 71 NRGAGKLFLTQARYVQKVLQRFDMWDAKPVSTPLAVHFKLSASLSPQSTDEEVYMSRVPY 130
Query: 135 ASAVGSFMYVMVFTRPDISQAVSVVSRFMTNPGKTHWEAVKWVLRYLKGIVDTGLCFGGD 194
+SAVGS MY MV TRPDISQAVSVVSR+M+NPGK HW+AVKW+ RYLKG V+T L FG +
Sbjct: 131 SSAVGSLMYAMVCTRPDISQAVSVVSRYMSNPGKVHWQAVKWIFRYLKGTVNTCLEFGRN 190
Query: 195 TCQVSGYVDSDYAGDLDRTRSTTGYVFRVHGAPVSWRSTLQSTVALSTTKAEYMAMAVGV 254
+ +SGYVDSD+AGDLDR RS TGYVF V G VSW++TLQ TVALSTT+ E+MA V
Sbjct: 191 SDILSGYVDSDFAGDLDRRRSLTGYVFSVGGCAVSWKATLQPTVALSTTETEFMAATEAV 250
Query: 255 KEALWLWGFLDDLGIKQECVDVWCDSQSAIHLAKNQVHHARTKHIDVIYHFVRDAIEEGD 314
KEA+WL G L +L + + ++CDSQSAIHLAKN V HARTKHI + YHF+R+ + G
Sbjct: 251 KEAMWLRGLLGELSLGHKETIIYCDSQSAIHLAKNPVFHARTKHIQLRYHFIRELLNGGT 310
Query: 315 VSLMKVHTDENPADMLTKVVTCSQFQHCL 343
+SL K+ EN ADMLTK+VT + + C+
Sbjct: 311 LSLKKIRGTENIADMLTKIVTTEKLRLCI 339