BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g0520.1
(244 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_011459694.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized p... 244 3e-76
NP_178997.2 uncharacterized protein [Arabidopsis thaliana] ABE65... 231 1e-71
ABK28489.1 unknown, partial [Arabidopsis thaliana] 231 1e-71
>XP_011459694.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101294629 [Fragaria vesca subsp. vesca]
Length = 380
Score = 244 bits (622), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 127/258 (49%), Positives = 162/258 (62%), Gaps = 32/258 (12%)
Query: 1 MGKNLFLQISSAVEAYDKEFVESCDAAKKIGLSPLQKMTVAMSMLAYGIEADATYDYVRV 60
M K LF +I+ A++ +D FV+ CD K+GLS LQK+T MLAYG+ ADA DY+++
Sbjct: 103 MSKTLFHRIADAIKDHDTFFVQQCDGVGKLGLSSLQKITAVFQMLAYGVPADALDDYLKI 162
Query: 61 GESTTTKYLKRFYRGIIEIF------------------------------DLAEGKTLPV 90
GES + +K+F R IIE+F +L EGK+ PV
Sbjct: 163 GESIAIRCMKKFCRAIIEVFGPXYLRRPNSDDIARLLYIGEERGFPGMLGNLVEGKSPPV 222
Query: 91 KYNIVRKEYNIGYYLVDGIYPKWSTLVQTISQPLGLKKQHFAMMQEVCRKDLERAFGVLQ 150
Y I+ K+YN+GYYL DGIYPKWSTLVQTI P G KK FA QE RKD ERAFGVL+
Sbjct: 223 NYTIMGKDYNVGYYLADGIYPKWSTLVQTIHDPQGQKKTLFATKQESYRKDAERAFGVLR 282
Query: 151 SRFSIIKDPSRFWDNNVLHDIMFAYIIMHNMIVEDEYVNCTIPNIFSK--IPTIEIVENE 208
SR +IIK P+RFWD VLHDIM IIMHN+I++DE F++ PT+E+V +E
Sbjct: 283 SRXAIIKGPARFWDKRVLHDIMTTCIIMHNIIIKDERDLSAPIKEFNEAPAPTVEMVVDE 342
Query: 209 VERFKRFLARHKQIKDKK 226
RF +FL RH++IKDKK
Sbjct: 343 TTRFNQFLDRHRKIKDKK 360
>NP_178997.2 uncharacterized protein [Arabidopsis thaliana] ABE65808.1
hypothetical protein At2g13770 [Arabidopsis thaliana]
AEC06258.1 nuclease [Arabidopsis thaliana]
Length = 343
Score = 231 bits (588), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 121/241 (50%), Positives = 152/241 (63%), Gaps = 26/241 (10%)
Query: 5 LFLQISSAVEAYDKEFVESCDAAKKIGLSPLQKMTVAMSMLAYGIEADATYDYVRVGEST 64
LFL+I A++ +D FV+ D K+GLS LQKMT A MLAYG+ AD+T +Y+++GEST
Sbjct: 103 LFLRIYDAIKRHDNYFVQRRDGVGKLGLSGLQKMTAAFRMLAYGVPADSTDEYIKIGEST 162
Query: 65 TTKYLKRFYRGIIEIFDL------------------------AEGKTLPVKYNIVRKEYN 100
+ LKRF R I+E+F AEG P Y I K YN
Sbjct: 163 ALESLKRFCRAIVEVFACCYLRSPDANDVARLLHIGESRGFPAEGTAPPASYVINGKPYN 222
Query: 101 IGYYLVDGIYPKWSTLVQTISQPLGLKKQHFAMMQEVCRKDLERAFGVLQSRFSIIKDPS 160
+GYYL DGIYPKWSTLVQTI P G KK+ FAM QE CRKD+ERAFGVLQ RF+I+ PS
Sbjct: 223 MGYYLADGIYPKWSTLVQTIHDPRGPKKKLFAMKQEACRKDVERAFGVLQLRFAIVAGPS 282
Query: 161 RFWDNNVLHDIMFAYIIMHNMIVEDEY-VNCTI-PNIFSKIPTIEIVENEVERFKRFLAR 218
R W+ VLHDIM + IIMHNMI+EDE ++ I + I +E+ ++ RF+ FLAR
Sbjct: 283 RLWNKTVLHDIMTSCIIMHNMIIEDERDIDAPIEERVEVPIEEVEMTGDDDTRFQEFLAR 342
Query: 219 H 219
H
Sbjct: 343 H 343
>ABK28489.1 unknown, partial [Arabidopsis thaliana]
Length = 344
Score = 231 bits (588), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 121/241 (50%), Positives = 152/241 (63%), Gaps = 26/241 (10%)
Query: 5 LFLQISSAVEAYDKEFVESCDAAKKIGLSPLQKMTVAMSMLAYGIEADATYDYVRVGEST 64
LFL+I A++ +D FV+ D K+GLS LQKMT A MLAYG+ AD+T +Y+++GEST
Sbjct: 103 LFLRIYDAIKRHDNYFVQRRDGVGKLGLSGLQKMTAAFRMLAYGVPADSTDEYIKIGEST 162
Query: 65 TTKYLKRFYRGIIEIFDL------------------------AEGKTLPVKYNIVRKEYN 100
+ LKRF R I+E+F AEG P Y I K YN
Sbjct: 163 ALESLKRFCRAIVEVFACCYLRSPDANDVARLLHIGESRGFPAEGTAPPASYVINGKPYN 222
Query: 101 IGYYLVDGIYPKWSTLVQTISQPLGLKKQHFAMMQEVCRKDLERAFGVLQSRFSIIKDPS 160
+GYYL DGIYPKWSTLVQTI P G KK+ FAM QE CRKD+ERAFGVLQ RF+I+ PS
Sbjct: 223 MGYYLADGIYPKWSTLVQTIHDPRGPKKKLFAMKQEACRKDVERAFGVLQLRFAIVAGPS 282
Query: 161 RFWDNNVLHDIMFAYIIMHNMIVEDEY-VNCTI-PNIFSKIPTIEIVENEVERFKRFLAR 218
R W+ VLHDIM + IIMHNMI+EDE ++ I + I +E+ ++ RF+ FLAR
Sbjct: 283 RLWNKTVLHDIMTSCIIMHNMIIEDERDIDAPIEERVEVPIEEVEMTGDDDTRFQEFLAR 342
Query: 219 H 219
H
Sbjct: 343 H 343