BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g0590.1
(105 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010236559.1 PREDICTED: uncharacterized protein LOC104584117 [... 92 1e-20
BAA22288.1 polyprotein [Oryza australiensis] 93 7e-20
CAD40471.2 OSJNBa0067G20.17 [Oryza sativa Japonica Group] 90 8e-20
>XP_010236559.1 PREDICTED: uncharacterized protein LOC104584117 [Brachypodium
distachyon]
Length = 250
Score = 91.7 bits (226), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 68/101 (67%), Gaps = 3/101 (2%)
Query: 6 FNFRSLLDKEKLNEHNFLDWERNLGIVLRMEGKQHVLESPIPVLDDNSTKEKINE--ERS 63
F RS+L+K+KLN NF +W RNL IVLR + K+HV+E+P+P N+ + +RS
Sbjct: 9 FALRSILEKDKLNGTNFTNWYRNLRIVLRHDKKEHVIENPLPDAPVNNATASVRNAYQRS 68
Query: 64 VRKMAEPVTCLMLATMEPTLQEQFIDMDAYSMIRQLREMFQ 104
+ E ++CLMLA MEP LQ+QF +++A+ MI L+ MFQ
Sbjct: 69 CDESTE-ISCLMLAYMEPELQQQFENVEAFDMIETLKGMFQ 108
>BAA22288.1 polyprotein [Oryza australiensis]
Length = 1317
Score = 92.8 bits (229), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
Query: 2 TKDIFNFRSLLDKEKLNEHNFLDWERNLGIVLRMEGKQHVLESPIP-VLDDNSTKEKINE 60
T FN RS+L+KEKLN NF+DW RNL IVL+ E K++VLE P P L +N+T
Sbjct: 6 TPSTFNLRSILEKEKLNGTNFMDWYRNLRIVLKQERKEYVLEVPYPEELPNNATATARRG 65
Query: 61 ERSVRKMAEPVTCLMLATMEPTLQEQFIDMDAYSMIRQLREMFQ 104
A ++CLMLATM P LQ+Q+ DA++ I+ LR MF+
Sbjct: 66 FEKHTNDALDISCLMLATMSPELQKQYESSDAHTTIQGLRGMFE 109
>CAD40471.2 OSJNBa0067G20.17 [Oryza sativa Japonica Group]
Length = 276
Score = 90.1 bits (222), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
Query: 2 TKDIFNFRSLLDKEKLNEHNFLDWERNLGIVLRMEGKQHVLESPIPV-LDDNSTKEKINE 60
T FN RS+L+KEKLN NF+DW RNL IVLR E K+ VLE P P L +N+T + E
Sbjct: 7 TSSSFNLRSILEKEKLNGTNFVDWYRNLRIVLRQEHKEFVLEEPFPTDLPNNATAARRRE 66
Query: 61 ERSVRKMAEPVTCLMLATMEPTLQEQFIDMDAYSMIRQLREMFQ 104
++CLML T+ P Q Q+ +DA+++I +L MF+
Sbjct: 67 HEKRCNEYLDISCLMLVTISPEFQRQYQTLDAHTIITRLCNMFE 110