BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g0600.1
(163 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010689051.1 PREDICTED: uncharacterized protein LOC104902832 [... 152 1e-44
ADB85429.1 putative retrotransposon protein [Phyllostachys edulis] 135 9e-34
XP_010666016.1 PREDICTED: uncharacterized protein LOC104883233 [... 127 8e-33
>XP_010689051.1 PREDICTED: uncharacterized protein LOC104902832 [Beta vulgaris
subsp. vulgaris]
Length = 149
Score = 152 bits (384), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 82/148 (55%), Positives = 103/148 (69%), Gaps = 8/148 (5%)
Query: 18 MIRLIGKLAKLGFPYSQQTATDTIPHSLHSGFNQFKMNYNMNGWDKTLEELHSMLLTAEK 77
MI + +LGFPYSQ+ ATD I HSLH GFN F++N+NMNG KTL ELH ML+TAE+
Sbjct: 1 MIGYFEAMERLGFPYSQELATDIILHSLHKGFNTFRLNFNMNGVSKTLAELHGMLMTAEQ 60
Query: 78 DVAIVETKKDVFMVQKDKGFKK--GGKQKKKTASKGKGKRVAKPKDKGPP---PDTKCFY 132
++ I KK+V MVQK+KGFKK GK+K+ + K KP+ K P + KCFY
Sbjct: 61 NITIA-PKKEVLMVQKEKGFKKEWAGKKKQDKGKQVATKTAIKPQAKAKPKVAANAKCFY 119
Query: 133 CDGKGHWKRNCPKFLEDKKNGTVASNSG 160
CD GHWKRNCPK+L+DKK+G AS+SG
Sbjct: 120 CDQIGHWKRNCPKYLKDKKSG--ASSSG 145
>ADB85429.1 putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 135 bits (339), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 82/170 (48%), Positives = 102/170 (60%), Gaps = 17/170 (10%)
Query: 4 RLEKGKAVGPHVRQMIRLIGKLAKLGFPYSQQTATDTIPHSLHSGFNQFKMNYNMNGWDK 63
+L +G V PH+ +M+ L KLGFP SQ+ ATD I SL + + QF +N++MNG DK
Sbjct: 213 KLAEGSPVSPHMIKMVGYTQSLEKLGFPLSQELATDLILASLPASYGQFILNFHMNGLDK 272
Query: 64 TLEELHSMLLTAEKDVAIVETKKDVFMVQKDKGFKKGGKQKKKTASKGKGKRVA------ 117
L ELH +L TAE + + + V MVQK FKK K +T KGKGK+V
Sbjct: 273 NLTELHMLLKTAEDSIKKINSH--VMMVQKSTSFKK----KARTWVKGKGKKVLDGIQTN 326
Query: 118 KPKDK---GPPPDTKCFYCDGKGHWKRNCPKFLED-KKN-GTVASNSGIN 162
KPK K GP + +CFYC GHWKRNC K+L D KKN GT S SGIN
Sbjct: 327 KPKLKTKSGPTQENECFYCKEPGHWKRNCKKYLADLKKNGGTKPSTSGIN 376
>XP_010666016.1 PREDICTED: uncharacterized protein LOC104883233 [Beta vulgaris
subsp. vulgaris]
Length = 317
Score = 127 bits (319), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 72/139 (51%), Positives = 87/139 (62%), Gaps = 3/139 (2%)
Query: 25 LAKLGFPYSQQTATDTIPHSLHSGFNQFKMNYNMNGWDKTLEELHSMLLTAEKDVAIVET 84
L +LG + D HSLH G QF +N+NMN DKT+ EL ML TAE + V
Sbjct: 7 LERLGVTLVDELPIDITLHSLHKGCGQFMLNFNMNELDKTMNELLGMLKTAEPSIK-VAP 65
Query: 85 KKDVFMVQKDKG-FKKGGKQKKKTASKGKGKRVAKPKDKGPPPDTKCFYCDGKGHWKRNC 143
K V M+QK KG FKK G +K+ SKGKGK+V K K G D +CF+ GHWKRNC
Sbjct: 66 KNHVLMIQKKKGVFKKQGNKKQYPQSKGKGKQVVKTK-AGATLDQECFHYHKPGHWKRNC 124
Query: 144 PKFLEDKKNGTVASNSGIN 162
PK+LEDKKNG +AS SGI+
Sbjct: 125 PKYLEDKKNGKIASTSGIH 143