BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g0660.1
(146 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017613541.1 PREDICTED: uncharacterized protein LOC108458646 [... 106 5e-24
XP_012478910.1 PREDICTED: uncharacterized protein LOC105794325 [... 100 2e-23
XP_012435374.1 PREDICTED: uncharacterized protein LOC105761994 [... 98 3e-22
>XP_017613541.1 PREDICTED: uncharacterized protein LOC108458646 [Gossypium
arboreum]
Length = 1099
Score = 106 bits (264), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 74/132 (56%), Gaps = 1/132 (0%)
Query: 3 TNFYGCPYKTNKMRSWDELKNHTLDHNNPWVVIGDLNSILHRSEKVGGKEAHPTHSVKIK 62
T FYG PY NK SWD L+ D + PW+V GD N I++ EK GG + +
Sbjct: 104 TGFYGSPYSNNKRTSWDLLRKLGQDQDLPWIVCGDFNEIMYSFEKSGGIQREQGRMEAFR 163
Query: 63 QVINELGLHDIGYTAP-FTWFNKQFTDTLIQERLDRALTNHQWLLDFLAPLLTHLSGISS 121
+V+ E L DIGY+ FTW +T I+ERLDR + N +W+ F + HL +S
Sbjct: 164 EVLKESQLVDIGYSGNWFTWERGNLPETNIKERLDRGVANEKWMTLFPLGNICHLPYSTS 223
Query: 122 DHKPILLTTKTN 133
DH+P+LL T ++
Sbjct: 224 DHRPLLLNTNSD 235
>XP_012478910.1 PREDICTED: uncharacterized protein LOC105794325 [Gossypium
raimondii]
Length = 240
Score = 100 bits (249), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 76/144 (52%), Gaps = 2/144 (1%)
Query: 2 ITNFYGCPYKTNKMRSWDELKNHTLDHNNPWVVIGDLNSILHRSEKVGGKEAHPTHSVKI 61
T FYG PY +K SWD L +D + PW+V GD N IL+ EK GG +
Sbjct: 69 FTGFYGSPYVQHKNASWDLLMTLGIDKSYPWLVSGDFNEILYSYEKCGGVPRDESRMHAF 128
Query: 62 KQVINELGLHDIGYTAP-FTWFNKQFTDTLIQERLDRALTNHQWLLDFLAPLLTHLSGIS 120
++ + L D+GY+ FTW +T I+ERLDR + N +W F A + HLS
Sbjct: 129 REALEHCQLEDMGYSGVWFTWERGNLPETNIRERLDRGVINDKWRFLFPAGRVNHLSYAM 188
Query: 121 SDHKPILLTTKTNST-IGHKPFKF 143
SDH P+L++T + G+ FKF
Sbjct: 189 SDHCPLLISTDGDRNHKGNSKFKF 212
>XP_012435374.1 PREDICTED: uncharacterized protein LOC105761994 [Gossypium
raimondii]
Length = 258
Score = 97.8 bits (242), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 69/130 (53%), Gaps = 1/130 (0%)
Query: 2 ITNFYGCPYKTNKMRSWDELKNHTLDHNNPWVVIGDLNSILHRSEKVGGKEAHPTHSVKI 61
T FYG PY NK SWD LK + PW+V GD N I + EK GG+
Sbjct: 69 FTGFYGSPYSQNKNASWDLLKTLGQEQEYPWLVSGDFNEIAYSFEKNGGQPREERKMAAF 128
Query: 62 KQVINELGLHDIGYTAP-FTWFNKQFTDTLIQERLDRALTNHQWLLDFLAPLLTHLSGIS 120
++ + E L D+GY+ +TW +T I+ERLDR + N +W+ F + HL+
Sbjct: 129 RETLQECHLSDLGYSGVWYTWERGNLPETNIRERLDRGVANEKWMELFPTGNINHLTSTL 188
Query: 121 SDHKPILLTT 130
SDH P+L++T
Sbjct: 189 SDHCPLLIST 198