BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g0930.1
(368 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAD21687.1 Strong similarity to gi|3600044 T12H20.12 protease ho... 288 2e-84
XP_008646585.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized p... 286 4e-84
XP_010669336.1 PREDICTED: copia protein isoform X2 [Beta vulgari... 280 4e-83
>AAD21687.1 Strong similarity to gi|3600044 T12H20.12 protease homolog from
Arabidopsis thaliana BAC gb|AF080119 and is a member of
the reverse transcriptase family PF|00078 [Arabidopsis
thaliana]
Length = 1415
Score = 288 bits (738), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 131/292 (44%), Positives = 187/292 (64%)
Query: 33 ATAKTWHHRLGHTTKEIYLTLEKENKIRISKKDMKNICSSCQLGKSQRLSFPISESSLSV 92
AT + WHHRLGH + L+ I+I+K +C CQ+GKS RL F IS+S +
Sbjct: 451 ATEEVWHHRLGHANSKALQHLQNSKAIQINKSRTSPVCEPCQMGKSSRLPFLISDSRVLH 510
Query: 93 PLQLIHCDIWGPSPILTSTGIKYYILFLDDFSRFFWVYPMKVRSDSLKCFQHFKRHNEKL 152
PL IHCD+WGPSP++++ G+KYY +F+DD+SR+ W YP+ +S+ L F F++ E
Sbjct: 511 PLDRIHCDLWGPSPVVSNQGLKYYAIFVDDYSRYSWFYPLHNKSEFLSVFISFQKLVENQ 570
Query: 153 FSHSIKSFQSDKARELSKGDFREFLNQYGIHFRCSCPYTQEQNGRAERKNRQITFVGNTL 212
+ IK FQSD E + L+++GIH R SCPYT +QNG AERK+R + +G ++
Sbjct: 571 LNTKIKVFQSDGGGEFVSNKLKTHLSEHGIHHRISCPYTPQQNGLAERKHRHLVELGLSM 630
Query: 213 LIQASMPKHFWFHAYATTTYIINRTPSKFLSLQTPYEVLFQKCPNYDTIKVFGSLCYPYL 272
L + P+ FW ++ T YIINR PS L +PYE LF + P+Y +++VFGS CYP L
Sbjct: 631 LFHSHTPQKFWVESFFTANYIINRLPSSVLKNLSPYEALFGEKPDYSSLRVFGSACYPCL 690
Query: 273 GNTKADKLSPKSAKCVFIGYNTAHKGYKCLDLVSDKEYVSRHVIFDESLFPF 324
+K P+S +CVF+GYN+ +KGY+C + K Y+SR+VIF+ES PF
Sbjct: 691 RPLAQNKFDPRSLQCVFLGYNSQYKGYRCFYPPTGKVYISRNVIFNESELPF 742
>XP_008646585.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC103628087 [Zea mays]
Length = 1134
Score = 286 bits (731), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 134/302 (44%), Positives = 188/302 (62%), Gaps = 1/302 (0%)
Query: 30 VAIATAKTWHHRLGHTTKEIYLTLEKENKIRISKKDMKNICSSCQLGKSQRLSFPISESS 89
A A++ TWH RLGH +++ L + + +++ +CQLG+ RL FPIS S
Sbjct: 339 AAAASSVTWHRRLGHPGRDVMSKLSSSTSVSGCRGSFEHLYHACQLGRHVRLPFPISSSR 398
Query: 90 LSVPLQLIHCDIWGPSPILTSTGIKYYILFLDDFSRFFWVYPMKVRSDSLKCFQHFKRHN 149
+ LIHCD+W SP+++ +G KYY+L LDDFS + W +P++ +SD+ HF
Sbjct: 399 AAGIFDLIHCDVWT-SPVISISGYKYYLLILDDFSHYLWTFPLRQKSDTFPTLSHFFAWV 457
Query: 150 EKLFSHSIKSFQSDKARELSKGDFREFLNQYGIHFRCSCPYTQEQNGRAERKNRQITFVG 209
FS +I+S Q D RE R+F G+H R SCPYT QNGRAER R + V
Sbjct: 458 STQFSRTIRSIQCDNGREFYNNVSRDFFLSRGVHLRMSCPYTSPQNGRAERMIRTMNDVV 517
Query: 210 NTLLIQASMPKHFWFHAYATTTYIINRTPSKFLSLQTPYEVLFQKCPNYDTIKVFGSLCY 269
+LL QAS+P +W A T TY++NR P+K ++ TPY LF P+YD ++VFG CY
Sbjct: 518 RSLLFQASLPVSYWAEALGTATYLLNRLPTKAVAHPTPYFALFGVHPSYDHLRVFGCACY 577
Query: 270 PYLGNTKADKLSPKSAKCVFIGYNTAHKGYKCLDLVSDKEYVSRHVIFDESLFPFASSDS 329
P L +T KL+P+S +CVF+GY+ HKGY+CLDL S + +SRHV+FDES FPF+S+ +
Sbjct: 578 PNLASTTPHKLAPRSTRCVFLGYSPDHKGYRCLDLASHRVLISRHVVFDESDFPFSSAPT 637
Query: 330 PS 331
S
Sbjct: 638 AS 639
>XP_010669336.1 PREDICTED: copia protein isoform X2 [Beta vulgaris subsp. vulgaris]
Length = 953
Score = 280 bits (717), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 141/324 (43%), Positives = 191/324 (58%), Gaps = 3/324 (0%)
Query: 25 VEEAHVAIATAKTWHHRLGHTTKEIYLTLEKENKIRISKKDMKNICSSCQLGKSQRLSFP 84
+ A A + WH RLGH I ++ + I S NIC+SC LGK +L F
Sbjct: 21 AQPAAFATLASPLWHARLGHPGHSILSSMHQNKLIHCSDSRTSNICNSCPLGKHIKLPFV 80
Query: 85 ISESSLSVPLQLIHCDIWGPSPILTSTGIKYYILFLDDFSRFFWVYPMKVRSDSLKCFQH 144
S S+ +P +IH D+W SP+L+S+G +YYI+ LDD+S + W +P+ +SD F
Sbjct: 81 ASSSTTMLPFDIIHSDLWT-SPVLSSSGHRYYIVLLDDYSNYLWTFPLAKKSDVYSIFHS 139
Query: 145 FKRHNEKLFSHSIKSFQSDKARELSKGDFREFLNQYGIHFRCSCPYTQEQNGRAERKNRQ 204
F F +IK+ Q D E F EF GIH R SCPYT QNG++ERK R
Sbjct: 140 FSTFINTHFERNIKNLQCDNGTEFDNRPFWEFCKSNGIHLRLSCPYTSSQNGKSERKLRT 199
Query: 205 ITFVGNTLLIQASMPKHFWFHAYATTTYIINRTPSKFLSLQTPYEVLFQKCPNYDTIKVF 264
I + TL+ AS+P FW HA + TY++N PSK LS ++P ++L+Q+ P Y ++VF
Sbjct: 200 INNIIRTLMAHASLPPSFWHHALSMATYLLNILPSKLLSGKSPLQILYQRDPIYSHLRVF 259
Query: 265 GSLCYPYLGNTKADKLSPKSAKCVFIGYNTAHKGYKCLDLVSDKEYVSRHVIFDESLFPF 324
G LCYP +T +KL P+S CVF+GY + H+GYKC DL S+K +SRHVIFDE+ FPF
Sbjct: 260 GCLCYPLFLSTTINKLQPRSTPCVFLGYPSNHRGYKCYDLSSNKIILSRHVIFDETQFPF 319
Query: 325 ASSDSPSLVSSTSSTYEVFPLPQL 348
A SP+ SST S + P P L
Sbjct: 320 AKLHSPT--SSTYSFLDDAPSPYL 341