BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g1110.1
(212 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAN74381.1 hypothetical protein VITISV_007944 [Vitis vinifera] 244 3e-71
KYP76316.1 Retrovirus-related Pol polyprotein from transposon TN... 226 2e-70
KYP54064.1 Retrovirus-related Pol polyprotein from transposon TN... 240 6e-70
>CAN74381.1 hypothetical protein VITISV_007944 [Vitis vinifera]
Length = 1884
Score = 244 bits (623), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 110/178 (61%), Positives = 141/178 (79%)
Query: 26 EAQKLLLTVGPAEPPEPKTLKTALKQPQWVNAMHEELAALHANKTWTSVPRPPHQNIVGS 85
++Q + ++ EPKT +TALK P W+ AM EE+ AL N+TW VPRPP NIVGS
Sbjct: 905 KSQMVTFAXXRSDISEPKTYRTALKIPHWLKAMQEEIKALIQNRTWDLVPRPPTTNIVGS 964
Query: 86 KWVFKTKLKADGTIERHKARLVAKGYSQIEGVDFAETYSPVIKTPTVRVVLNVALVRGWP 145
KWVFKTKLK DGTI+R+KARLVA+G+SQI G+DF ET+SPVIK T+R++ ++A++ GW
Sbjct: 965 KWVFKTKLKEDGTIDRYKARLVARGFSQIPGLDFGETFSPVIKHTTIRMIFSLAVILGWK 1024
Query: 146 LRQLDVKNAFLHGHLKETVYMEQPPGFVDQSKSNYVFRLNKALSGLKQAPRAWFDRFS 203
+RQLDVKNAFLHG LKE V+MEQPPGF+++ N+V +LN++L GLKQAPRAWFDR S
Sbjct: 1025 MRQLDVKNAFLHGFLKEEVFMEQPPGFINEVLPNHVCKLNRSLYGLKQAPRAWFDRLS 1082
>KYP76316.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 340
Score = 226 bits (576), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 105/164 (64%), Positives = 129/164 (78%)
Query: 41 EPKTLKTALKQPQWVNAMHEELAALHANKTWTSVPRPPHQNIVGSKWVFKTKLKADGTIE 100
+PK K+A+K PQW+ M +E++ALH N T T VPR NIVGSKWVF+TK K+D TIE
Sbjct: 1 DPKGFKSAMKHPQWLATMEDEISALHNNHTGTLVPRLSAPNIVGSKWVFRTKHKSDSTIE 60
Query: 101 RHKARLVAKGYSQIEGVDFAETYSPVIKTPTVRVVLNVALVRGWPLRQLDVKNAFLHGHL 160
R KARLVA+G++QI G D++ T+SPV+K T+R++L++A++ GWPL QLDVKNAFLHGHL
Sbjct: 61 RLKARLVAQGFTQIPGFDYSLTFSPVVKATTIRLILSLAVLNGWPLHQLDVKNAFLHGHL 120
Query: 161 KETVYMEQPPGFVDQSKSNYVFRLNKALSGLKQAPRAWFDRFSS 204
E VYMEQPPGFVD +V RLNKAL GLKQAPRAWF R SS
Sbjct: 121 TEIVYMEQPPGFVDPRFPTHVCRLNKALYGLKQAPRAWFQRLSS 164
>KYP54064.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1683
Score = 240 bits (613), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 116/195 (59%), Positives = 140/195 (71%), Gaps = 1/195 (0%)
Query: 10 TKNNIFIQPKTSIRKTEAQKLLLTVGPAEPPEPKTLKTALKQPQWVNAMHEELAALHANK 69
++N IF +P Q L +PK K +K PQW+ AM +EL ALH N
Sbjct: 658 SQNGIF-RPNLRYALAHHQPTTLLTALHGAADPKGFKFVMKHPQWLAAMEDELFALHNNH 716
Query: 70 TWTSVPRPPHQNIVGSKWVFKTKLKADGTIERHKARLVAKGYSQIEGVDFAETYSPVIKT 129
TWT VPRP NIVGSKWVF+TK K+DGTIER KARLVA+G++QI G D++ T+SPV+K
Sbjct: 717 TWTLVPRPSAPNIVGSKWVFRTKHKSDGTIERLKARLVAQGFTQIPGFDYSLTFSPVVKA 776
Query: 130 PTVRVVLNVALVRGWPLRQLDVKNAFLHGHLKETVYMEQPPGFVDQSKSNYVFRLNKALS 189
T+R++L++A++ GWPL QLDVKNAFLHGHL ETVYMEQPPGFVD +V RLNKAL
Sbjct: 777 TTIRLILSLAVLNGWPLHQLDVKNAFLHGHLTETVYMEQPPGFVDPRFQTHVCRLNKALY 836
Query: 190 GLKQAPRAWFDRFSS 204
GLKQAPRAWF R SS
Sbjct: 837 GLKQAPRAWFQRLSS 851