BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g1790.1
(111 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KOM58517.1 hypothetical protein LR48_Vigan11g155100 [Vigna angul... 164 4e-49
JAT65344.1 Retrovirus-related Pol polyprotein from transposon TN... 167 7e-49
CAN67337.1 hypothetical protein VITISV_004415 [Vitis vinifera] 163 4e-48
>KOM58517.1 hypothetical protein LR48_Vigan11g155100 [Vigna angularis]
Length = 225
Score = 164 bits (415), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 74/111 (66%), Positives = 89/111 (80%)
Query: 1 MDRVPYASAVGSLMYAIVCTRPDISHPVSVVNRFMANPGKTHWEVVKWVLRYLKGTIDTT 60
+ RVPYASAVGSLMYA++CTRPDI+H V V+RFMANPG+ HW VK VLRY+KGT D
Sbjct: 3 ISRVPYASAVGSLMYAMICTRPDIAHAVGAVSRFMANPGEEHWNAVKRVLRYIKGTSDVA 62
Query: 61 LCFGGDTCQVSGYVDSNYVGDLDRRQSTTGYVFRVHGALVSWRSMLQSTIA 111
LCFGG V GYVDS+Y GDLD+R+STTGYVF++ G +VSW S LQ+ +A
Sbjct: 63 LCFGGSKFIVRGYVDSDYAGDLDKRKSTTGYVFKLAGGVVSWLSKLQTVVA 113
>JAT65344.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Anthurium amnicola]
Length = 346
Score = 167 bits (423), Expect = 7e-49, Method: Composition-based stats.
Identities = 74/111 (66%), Positives = 92/111 (82%)
Query: 1 MDRVPYASAVGSLMYAIVCTRPDISHPVSVVNRFMANPGKTHWEVVKWVLRYLKGTIDTT 60
M RVPY+SAVGSLMYA+VCTRPDIS VSVV+R+M+NPGK HW+ VKW+ RYLKGT++T
Sbjct: 125 MSRVPYSSAVGSLMYAMVCTRPDISQAVSVVSRYMSNPGKVHWQAVKWIFRYLKGTVNTC 184
Query: 61 LCFGGDTCQVSGYVDSNYVGDLDRRQSTTGYVFRVHGALVSWRSMLQSTIA 111
L FG ++ +SGYVDS++ GDLDRR+S TGYVF V G VSW++ LQ T+A
Sbjct: 185 LEFGRNSDILSGYVDSDFAGDLDRRRSLTGYVFSVGGCAVSWKATLQPTVA 235
>CAN67337.1 hypothetical protein VITISV_004415 [Vitis vinifera]
Length = 281
Score = 163 bits (413), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 68/110 (61%), Positives = 90/110 (81%)
Query: 1 MDRVPYASAVGSLMYAIVCTRPDISHPVSVVNRFMANPGKTHWEVVKWVLRYLKGTIDTT 60
M +VPYASA+GSLMYA+VCTRPDI+H V VV+RFM+ PGK HWE VKW+LRYLKG++DT
Sbjct: 60 MSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTC 119
Query: 61 LCFGGDTCQVSGYVDSNYVGDLDRRQSTTGYVFRVHGALVSWRSMLQSTI 110
LCF G + ++ GYVD+++ GD+D R+STTG+VF + G ++SW S LQ +
Sbjct: 120 LCFTGASLKLQGYVDADFAGDIDSRKSTTGFVFTLGGTVISWTSNLQKIV 169