BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g1800.1
(115 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_015866800.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized p... 159 3e-43
AAT44257.1 putative polyprotein [Oryza sativa Japonica Group] 155 6e-42
ABA99474.1 retrotransposon protein, putative, Ty1-copia subclass... 155 1e-41
>XP_015866800.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC107404367, partial [Ziziphus jujuba]
Length = 807
Score = 159 bits (402), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 71/115 (61%), Positives = 95/115 (82%)
Query: 1 MLKHGFRRSDYDCCIYIKKLRKGDFIYLLLYVDDMLIASRSMVEIDKLKSQLSQEFEMKD 60
M HG+ RS YD C+Y +KL G FIYLLLYVDDMLI ++ +I++LK++LS EFEMKD
Sbjct: 52 MFSHGYSRSQYDSCVYFRKLEDGSFIYLLLYVDDMLIVAKKKSDINRLKAELSGEFEMKD 111
Query: 61 MGAAKKILGIEIKRERSSKKLYLSQKGYIERVVSRFGMQNAKAMSTTLAPHFRLS 115
+GAAKKILG+EI+R+RS+ KL+L+Q+ ++E+V+ RFGM+NAK +ST LA HFRLS
Sbjct: 112 LGAAKKILGMEIERDRSAGKLFLTQRSFVEKVLERFGMKNAKPVSTPLATHFRLS 166
>AAT44257.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 155 bits (393), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 78/115 (67%), Positives = 92/115 (80%), Gaps = 1/115 (0%)
Query: 1 MLKHGFRRSDYDCCIYIKKLRKGDFIYLLLYVDDMLIASRSMVEIDKLKSQLSQEFEMKD 60
M FRRS+YD C+Y+K + G IYLLLYVDDMLIA++ EI+KLK+QLS EFEMKD
Sbjct: 863 MFSQKFRRSNYDSCVYLK-VVDGSSIYLLLYVDDMLIAAKDKSEIEKLKAQLSSEFEMKD 921
Query: 61 MGAAKKILGIEIKRERSSKKLYLSQKGYIERVVSRFGMQNAKAMSTTLAPHFRLS 115
+GAAKKILG+EI RER S KLYLSQKGYIE+V+ RF M +AK +ST LA HFRLS
Sbjct: 922 LGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRLS 976
>ABA99474.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 983
Score = 155 bits (391), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 78/115 (67%), Positives = 92/115 (80%), Gaps = 1/115 (0%)
Query: 1 MLKHGFRRSDYDCCIYIKKLRKGDFIYLLLYVDDMLIASRSMVEIDKLKSQLSQEFEMKD 60
ML FRRS+YD C+Y+K + G IYLLLYVDDMLIA++ EI+KLK+QLS EFEMKD
Sbjct: 726 MLSQKFRRSNYDNCVYLKVV-DGSAIYLLLYVDDMLIAAKDKSEIEKLKAQLSSEFEMKD 784
Query: 61 MGAAKKILGIEIKRERSSKKLYLSQKGYIERVVSRFGMQNAKAMSTTLAPHFRLS 115
+GAAKKILG+EI RER S KLYLSQKGYIE+V+ RF M +AK +ST LA HFR S
Sbjct: 785 LGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRSS 839