BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g1820.1
(221 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_007028624.1 Uncharacterized protein TCM_024518 [Theobroma cac... 155 3e-43
XP_007038204.1 Transducin/WD40 repeat-like superfamily protein [... 158 5e-41
KHN13665.1 Retrovirus-related Pol polyprotein from transposon TN... 137 1e-35
>XP_007028624.1 Uncharacterized protein TCM_024518 [Theobroma cacao] EOY09126.1
Uncharacterized protein TCM_024518 [Theobroma cacao]
Length = 277
Score = 155 bits (392), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 88/214 (41%), Positives = 142/214 (66%), Gaps = 11/214 (5%)
Query: 10 SGKYEMVKFNEKNDFSYWRMQMKNLLISQKLHKTLTGKK--LGDMSNEDWEELDFEARTT 67
S KYE+ KFN +NDFS WR++M LL+ Q L K L GK+ ++S+ + ++L +A +
Sbjct: 5 STKYEIEKFNGRNDFSLWRVKMCALLVQQGLLKALKGKEHLPSNLSDSEKDDLMEKAHSA 64
Query: 68 IMLYLERDVAFLVDGETMASSVSLKLESNFMTKTLTIRVYLKSKLFTCRMEEGSSIQEYV 127
I+L L +V V E A+++ KLES ++TK+LT R+Y+K +L+T +M EG+S+ ++
Sbjct: 65 ILLTLSDEVLREVTDEESAAAMWFKLESIYITKSLTNRLYMKQRLYTLKMSEGTSVNTHI 124
Query: 128 NRFDKIISDLKDSDVQVEDQ--ALILLLSLPKSYENLVQTLMFVGDSLSMEETRNLLLAD 185
+ F+++I DLK+ DV++ED+ ALILL LP SYEN V T+++ D+L+ E+ R L +
Sbjct: 125 DEFNRVILDLKNIDVKIEDEDLALILLCYLPPSYENFVDTMLYGRDTLTFEDVRAYLNSK 184
Query: 186 DLRKVSTSSMTSGGV-DKDQAQGLFATRGRSNER 218
+L+K GG+ +++QA+GL RGR E+
Sbjct: 185 ELKK------KVGGIRNENQAEGLVVNRGRGKEK 212
>XP_007038204.1 Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
EOY22705.1 Transducin/WD40 repeat-like superfamily
protein [Theobroma cacao]
Length = 1029
Score = 158 bits (399), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 90/214 (42%), Positives = 142/214 (66%), Gaps = 11/214 (5%)
Query: 10 SGKYEMVKFNEKNDFSYWRMQMKNLLISQKLHKTLTGKK--LGDMSNEDWEELDFEARTT 67
S KYE+ KFN +NDFS WR++M+ LL+ Q L K L GK+ ++S+ + ++L +A +
Sbjct: 127 STKYEIEKFNGRNDFSLWRVKMRALLVQQGLLKALKGKEHLPSNLSDGEKDDLMKKAHSV 186
Query: 68 IMLYLERDVAFLVDGETMASSVSLKLESNFMTKTLTIRVYLKSKLFTCRMEEGSSIQEYV 127
I+L L +V V E A++V KLES +MTK+LT R+Y+K +L+T +M EG+S+ ++
Sbjct: 187 ILLALSDEVLREVTDEESAAAVWFKLESIYMTKSLTNRLYMKQRLYTLKMSEGTSVNTHI 246
Query: 128 NRFDKIISDLKDSDVQVEDQ--ALILLLSLPKSYENLVQTLMFVGDSLSMEETRNLLLAD 185
+ F+++I DLK+ DV++ED+ ALILL LP SYEN V T+++ D+L+ E+ R L
Sbjct: 247 DEFNRVILDLKNIDVKIEDEDLALILLCYLPPSYENFVDTMLYGRDTLTFEDVRASLNFK 306
Query: 186 DLRKVSTSSMTSGGV-DKDQAQGLFATRGRSNER 218
+L+K GG+ +++QA+GL RGR E+
Sbjct: 307 ELKK------KVGGIRNENQAEGLVVNRGRGKEK 334
>KHN13665.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 337
Score = 137 bits (345), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 136/211 (64%), Gaps = 9/211 (4%)
Query: 12 KYEMVKFNEKNDFSYWRMQMKNLLISQKLHKTLTG--KKLGDMSNEDWEELDFEARTTIM 69
++++ KF +NDFS R++M+ LL+ Q L L G K +S+++ ++L +A +TI+
Sbjct: 4 RFDVEKFTGENDFSLRRIKMQALLVHQGLDDALQGASKLPSTLSDKEKKDLLSKAHSTII 63
Query: 70 LYLERDVAFLVDGETMASSVSLKLESNFMTKTLTIRVYLKSKLFTCRMEEGSSIQEYVNR 129
L L +V V E A+ + LKLES +MTK+LT ++YLK +L +MEEGSSI+E+V+
Sbjct: 64 LSLGDEVLREVAEEKSAAGIWLKLESLYMTKSLTNKLYLKKRLHQLKMEEGSSIKEHVSL 123
Query: 130 FDKIISDLKDSDVQV--EDQALILLLSLPKSYENLVQTLMFVGDSLSMEETRNLLLADDL 187
F K + DLK DV++ EDQA++LL SLP S+ENLV T++F D+L++EE + L + +L
Sbjct: 124 FTKAVLDLKSVDVRIDEEDQAVMLLCSLPSSFENLVDTMLFGRDTLTLEEVKATLNSREL 183
Query: 188 RKVSTSSMTSGGVDKDQAQGLFATRGRSNER 218
+K T + GG + L A RGR +R
Sbjct: 184 KKKITENKGEGG----DPEALMA-RGRLEKR 209