BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g1850.1
(315 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP67620.1 LINE-1 reverse transcriptase isogeny [Cajanus cajan] 201 2e-55
EEE69906.1 hypothetical protein OsJ_29747 [Oryza sativa Japonica... 189 2e-50
GAU20604.1 hypothetical protein TSUD_33400 [Trifolium subterraneum] 178 1e-46
>KYP67620.1 LINE-1 reverse transcriptase isogeny [Cajanus cajan]
Length = 756
Score = 201 bits (510), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/314 (36%), Positives = 173/314 (55%), Gaps = 22/314 (7%)
Query: 11 AEQFRNVIMDCNMMDIRYSEPFYTWANGRELQNCIRERLDRVLVSPNWRIRFPNA--QVK 68
A +F+ ++ +C+++D+ Y YTW I RLDR L + +WR+ FP A +V
Sbjct: 163 ASEFQTMLDNCDLLDLGYFGNKYTWQRPSMGGRLISRRLDRALGNQSWRVLFPEATLEVN 222
Query: 69 HLPR-FTSNHTPIILNTVRARIKGGLPFCFEAHWTEHEEFGEVI------------KNWL 115
H+ F N N V ++ F+ + E GE I KN L
Sbjct: 223 HVSGLFLPNGEWCSDNNV---LEHEASLYFKNIFCMREATGESIITPNMPTLSDDNKNLL 279
Query: 116 LSTIRTRDEIWGVIKKMKSCKSPGPDGFPTLLFKECWHVVGDGETNQLRTIFETGVLPGN 175
++ + T++E++ + MKS K+PGPDGF + FK WHVVGD N + F+TG++
Sbjct: 280 VAPV-TKEEVFKALTGMKSFKAPGPDGFQPIFFKLYWHVVGDDVWNLINEAFQTGIIDTK 338
Query: 176 LNHTCIALIPKVSSPGTLADYRPISLCNVLYIIIAKIITNRLRPLLDKVIFPTQNAFVPG 235
L T I LIPKV +P + D+RPISLCNV+Y +I K++ NRLR + ++ P Q++F+PG
Sbjct: 339 LAETLIVLIPKVDAPLSYKDFRPISLCNVVYKLITKVLVNRLRVFIGNIMSPLQSSFIPG 398
Query: 236 RQIADNVIVAQKIFHSMVYTSAKDGAFAIKVDMAKAYDRVDWSFLSEVLADVKKMAFRYI 295
R DN I+ Q++ H M + K G K+D+ KAYDR+DW FL+ VL D F I
Sbjct: 399 RSTVDNAIILQEVLHFMNKSKRKKGDLIFKLDLEKAYDRIDWEFLNNVLLD---FGFPDI 455
Query: 296 SMKQGLCCMTPSVM 309
+ + + C++ S +
Sbjct: 456 TCRLIMNCVSSSSL 469
>EEE69906.1 hypothetical protein OsJ_29747 [Oryza sativa Japonica Group]
Length = 1139
Score = 189 bits (479), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/316 (36%), Positives = 170/316 (53%), Gaps = 28/316 (8%)
Query: 3 RCRTKSQVAEQFRNVIMDCNMMDIRYSEPFYTWANGRELQNCIRERLDRVLVSPNWRIRF 62
R R +SQ+ FR+ + C + D+ + +T+ N RE N NWR F
Sbjct: 576 RPRNESQM-RAFRDALHSCELHDLGFRGLPHTYDNKREGWN-------------NWRDVF 621
Query: 63 PNAQVKHLPRFTSNHTPIILNTVRARIKGGLPFC--FEAHWTEHEEFGEVI-KNWLLSTI 119
NAQ+ HL S+H PI+L G C +E W EVI + W S
Sbjct: 622 SNAQLSHLVSPCSDHCPIVLQLSGDSRTQGRKKCLQYEIFWEREAAISEVIGEAW--SEY 679
Query: 120 RTRDEIWGVIKKMKSCKSPGPDGFPTLLFKECWHVVGDGETNQLRTIFETGVLPGNLNHT 179
T++++ G I K S K+PGPDGFP ++ W + ++ F +G++P +N T
Sbjct: 680 GTKEDL-GEINKALS-KAPGPDGFPARFYQRNWGGLKSDIVRAVKEFFRSGIMPAGVNDT 737
Query: 180 CIALIPKVSSPGTLADYRPISLCNVLYIIIAKIITNRLRPLLDKVIFPTQNAFVPGRQIA 239
I LIPK+ P L D RPISLCNV+Y +++K + NRLRPLLD++I Q+AFVPGR I
Sbjct: 738 AIVLIPKIDQPTELKDLRPISLCNVIYKVVSKCLVNRLRPLLDELISVNQSAFVPGRMIT 797
Query: 240 DNVIVAQKIFHSMVYT-SAKDGAFAIKVDMAKAYDRVDWSFLSEVLADVKKMAFRYISMK 298
DN ++A + FH + + A A K+D++KAYDRVDW FL + + K+ F + ++
Sbjct: 798 DNALLAFECFHYIQKNKNPNKAASAYKLDLSKAYDRVDWGFLEQAMY---KLGFAHRWVR 854
Query: 299 QGLCCMTPSVMIEYSV 314
+ C+T + YSV
Sbjct: 855 WIMECIT---TVRYSV 867
>GAU20604.1 hypothetical protein TSUD_33400 [Trifolium subterraneum]
Length = 1174
Score = 178 bits (451), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 123/188 (65%), Gaps = 3/188 (1%)
Query: 121 TRDEIWGVIKKMKSCKSPGPDGFPTLLFKECWHVVGDGETNQLRTIFETGVLPGNLNHTC 180
T+ E+ + MK K+PGPDGF + FK+ WH+VGD + ++T F TG N+++T
Sbjct: 350 TKAEVTATLNSMKPFKAPGPDGFQCIFFKQYWHIVGDDIFHLVKTAFSTGNFDHNISNTL 409
Query: 181 IALIPKVSSPGTLADYRPISLCNVLYIIIAKIITNRLRPLLDKVIFPTQNAFVPGRQIAD 240
IALIPK+ +P T D+RPISLCN++Y +IAK++ +RLRP+LD +I P Q++F+PGR +D
Sbjct: 410 IALIPKIDTPKTFKDFRPISLCNIVYKLIAKVLVHRLRPILDNIIGPFQSSFLPGRGTSD 469
Query: 241 NVIVAQKIFHSMVYTSAKDGAFAIKVDMAKAYDRVDWSFLSEVLADVKKMAFRYISMKQG 300
N IV Q+I H M + K G A K+D+ KA+D V+W FL L D F I+++
Sbjct: 470 NAIVLQEIIHFMKRSKNKKGYAAFKLDLEKAFDNVNWDFLQNCLFD---FGFPEITIRLI 526
Query: 301 LCCMTPSV 308
+ C+T S
Sbjct: 527 MHCVTSST 534