BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g1910.1
(790 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAC95126.1 gag-pol polyprotein [Populus deltoides] 577 0.0
AAT58770.1 putative polyprotein [Oryza sativa Japonica Group] 409 e-122
AAT47108.1 putative polyprotein [Oryza sativa Japonica Group] 383 e-114
>CAC95126.1 gag-pol polyprotein [Populus deltoides]
Length = 1382
Score = 577 bits (1486), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/557 (57%), Positives = 392/557 (70%), Gaps = 24/557 (4%)
Query: 9 LFREEKEVNNKYCTEKEDWDEGRLALTESEELPACPPYIARREEGRLVQFLMAVRSDFES 68
L ++ + Y + WD+ LALTES EL AC YI RRE+ RLVQFL A+RSDFE
Sbjct: 120 LHQKNMSIQEFYSAMTDLWDQ--LALTESVELKACGAYIERREQQRLVQFLTALRSDFEG 177
Query: 69 IRSTILHSKPLRSIAKVVNELMAEETRLKYQARKNILQTPTETVLAVNSKPNQNHQNKPY 128
+R +ILH PL S+ VV+EL+AEE RL+ + K IL +VLAV SKP NHQNKPY
Sbjct: 178 LRGSILHRSPLPSVDSVVSELLAEEIRLQSYSEKGILSASNPSVLAVPSKPFSNHQNKPY 237
Query: 129 TKVAMDVCSFCKQKA---AVIPP---SDSSGSSGSSSYMPKIDNVVDQFQMFQKFLAMKP 182
T+V D CSFCKQK A P + + SGS S N Q ++ P
Sbjct: 238 TRVGFDECSFCKQKGHWKAQCPKLRQQNQAWKSGSQSQ----SNAHRSPQGYKP-----P 288
Query: 183 HVMSSAPQGSLAPKSSSTTLDSLSDLFQRFLATQPHALSSSEGLFYLIFSSSMPSSVWIL 242
H ++A +A S T ++L++ FQ+FL+ QP A+S+S SS + S W+L
Sbjct: 289 HHNTAA----VASPGSITDPNTLAEQFQKFLSLQPQAMSASSIGQLPHSSSGISHSEWVL 344
Query: 243 DSGASRHMSPNLSSFVSLKHISDLPVRTVDGTPMSLGGIGSVVTPDLSLQNVLHVPELTL 302
DSGAS HMSP+ SSF S+ +S +PV T DGTPM L G+GSVVT LSL NV +P+L L
Sbjct: 345 DSGASHHMSPDSSSFTSVSPLSSIPVMTADGTPMPLAGVGSVVTLHLSLPNVYLIPKLKL 404
Query: 303 NLSFIGQLCHS-RCLVLFSSTGCYVQDVQSQKLIGTGRRQGALYFVEELKVPDVAASTLD 361
NL+ IGQ+C S LV+FS + C VQD+QSQKLIGTGRR+ LY ++ELKVP V A+T
Sbjct: 405 NLASIGQICDSGDYLVMFSGSFCCVQDLQSQKLIGTGRRENGLYILDELKVPVVVAATTV 464
Query: 362 --LSSFRLSPSSSFYLWHSRLGHVSPSRLKYLVSTSALGDLKVKNISDCSGYKLAKFSAL 419
SSSFYLWHSRLGHVS SRL++L ST ALG+LK +ISDCSG KLAKFSAL
Sbjct: 465 DLSFFRLSLSSSSFYLWHSRLGHVSSSRLRFLASTGALGNLKTCDISDCSGCKLAKFSAL 524
Query: 420 PFTRSLTISAKPFDLFRSDVWGPFSVPTKGGSQYYVSFIDDCTRFCWIYLMKHRSEFYDI 479
PF RS ++S+ PFDL SDVWGP V TKGGS+YYVSFIDD TR+CW+YLMKHRSEF++I
Sbjct: 525 PFNRSTSVSSSPFDLIHSDVWGPSPVSTKGGSRYYVSFIDDHTRYCWVYLMKHRSEFFEI 584
Query: 480 YQQFQALVKTQYSSTIKCFRCDLGGKYTSNKFRELLAMNGTVHQSSCTDTPEQNGVAERK 539
Y F+AL+KTQ+S+ IKCFRCDLGG+YTSNKF ++LA++GT+HQ+SCTDTPEQNGVAERK
Sbjct: 585 YAAFRALIKTQHSAVIKCFRCDLGGEYTSNKFCQMLALDGTIHQTSCTDTPEQNGVAERK 644
Query: 540 HRHIVETARSLLLSASV 556
HRHIVETARSLLLSA V
Sbjct: 645 HRHIVETARSLLLSAFV 661
Score = 310 bits (794), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 157/240 (65%), Positives = 183/240 (76%), Gaps = 6/240 (2%)
Query: 557 PITHKFYVSRHVVFLEHIPYFSIPANANDVTPSNLIHIDPFSD--VYDTS----TVHVEP 610
PIT K YVS HVVFLEHIP+FSIP+ + +T S+LIHIDPFS+ DTS ++
Sbjct: 747 PITQKLYVSHHVVFLEHIPFFSIPSTTHSLTKSDLIHIDPFSEDSGNDTSPYVRSICTHN 806
Query: 611 AAPDIFDVPLTCDVPPTPTADQALDEIAHPPSRYPHRVRKSTQLPDYVYSTFSPSFTSFL 670
+A + T + + TA QA EI PP R R+RKST+LPD+ YS +S SFTSFL
Sbjct: 807 SAGTGTLLSGTPEASFSSTAPQASSEIVDPPPRQSIRIRKSTKLPDFAYSCYSSSFTSFL 866
Query: 671 ASIHCHSEPPSYKEAVVDPLWQKAMDEELSALHKTDTWALVPLPCSKRIIGSRWVYKIKT 730
A IHC EP SYKEA++DPL Q+AMDEELSALHKTDTW LVPLP K ++G RWVYKIKT
Sbjct: 867 AYIHCLFEPSSYKEAILDPLGQQAMDEELSALHKTDTWDLVPLPPGKSVVGCRWVYKIKT 926
Query: 731 KSDGSIERYKARLVAKGFSQEYGMDYEETFAPVAKMTIVRMLIAVASFRQWHISQMDVKN 790
SDGSIERYKARLVAKG+SQ+YGMDYEETFAP+AKMT +R LIAVAS RQWHISQ+DVKN
Sbjct: 927 NSDGSIERYKARLVAKGYSQQYGMDYEETFAPIAKMTTIRTLIAVASIRQWHISQLDVKN 986
>AAT58770.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1419
Score = 409 bits (1052), Expect = e-122, Method: Compositional matrix adjust.
Identities = 255/641 (39%), Positives = 353/641 (55%), Gaps = 57/641 (8%)
Query: 167 VVDQFQMFQKFLAMKPHVMSSAPQGSLAPKSSSTTLDSLSDLFQRFLATQPHALSS--SE 224
++D+ ++++ ++ KPH+ + A L+ L L T P + + S
Sbjct: 423 IIDELRLWE--MSNKPHIHDKDAKSEFA--------TFLNQLAHTPLKTDPSSCIADVSM 472
Query: 225 GLFYLIFSSSMPSSVWILDSGASRHMSPNLSSFVSLKHISDLPVRTVDGTPMSLGGIGSV 284
+ S+++ S WILDSGAS HM+P++S S V+T DGT + + G++
Sbjct: 473 DITGCSLSANVTDSCWILDSGASFHMTPDISQLQSCSLTKASSVQTADGTILPVSLQGTL 532
Query: 285 VTPDLSLQNVLHVPELTLNLSFIGQLCHSRCLVLFSSTGCYVQDVQSQKLIGTGRRQGA- 343
T + ++ +V +VP L++ L +GQL +C V+F CYV D + L+G G R
Sbjct: 533 QTKEYTIPDVFYVPNLSMKLISVGQLTDMKCHVVFDEAACYVLDRATGNLVGAGHRLNGP 592
Query: 344 --LYFVEELKVPDVAASTLDLSSFRLSP-----------SSSFYLWHSRLGHVSPSRLKY 390
LY ++ L +P +S +S + S+SF WH RLGH+ SRL
Sbjct: 593 RGLYVLDHLHLPTSTSSGFPGNSASATSITSNSSVYSSLSASFPQWHHRLGHLCGSRLST 652
Query: 391 LVSTSALGDLKVKNISDCSGYKLAKFSALPFTRSLTISAKPFDLFRSDVWGPFSVPTKGG 450
LV LG++ ++ C G KL K LP+ S++ S PF L SDVWGP +KGG
Sbjct: 653 LVQQGVLGNVSIETDFVCKGCKLGKQVQLPYRSSMSRSTSPFALVHSDVWGPAPFHSKGG 712
Query: 451 SQYYVSFIDDCTRFCWIYLMKHRSEFYDIYQQFQALVKTQYSSTIKCFRCDLGGKYTSNK 510
+YYV F+DD +R+ WIY MKHRSE Y +Y+ F ++V TQ+S++IK FR D GG+Y SN
Sbjct: 713 HRYYVIFVDDFSRYTWIYFMKHRSELYQVYKSFASMVHTQFSTSIKNFRSDSGGEYLSNA 772
Query: 511 FRELLAMNGTVHQSSCTDTPEQNGVAERKHRHIVETARSLLLSASVPITHKFYVSRHVVF 570
FR+LL+ +GT+ Q SC QNGVAERKHRHI+ETAR+LL+++ VP
Sbjct: 773 FRQLLSDHGTLPQLSCPGAHAQNGVAERKHRHIIETARTLLIASHVP------------- 819
Query: 571 LEHIPYFSIPANANDVTPSNLIHIDPFSDVYDTSTVHVEPAAPDIFDVPLTCDVPPTPTA 630
P+F A + V LI++ P S + S P+ D P
Sbjct: 820 ----PHFWAEAVSTSVY---LINLQPSSILQGRSAGDQSPSRLTKSSELSIDDSNELPVD 872
Query: 631 DQ-ALDEIAHPPSRYPHRVRKSTQLPDYVYSTFSPSFTSFLASIHCHSEPPSYKEAVVDP 689
D + P +RY R R S +P YS A EP +Y+EAV
Sbjct: 873 DMPIPSSPSSPAARYGLRDR-SKIMPHPRYSC---------AIADGVQEPRTYQEAVTIN 922
Query: 690 LWQKAMDEELSALHKTDTWALVPLPCSKRIIGSRWVYKIKTKSDGSIERYKARLVAKGFS 749
W+ AM+EELSAL T TW +VPLP I +WV+K+KT+S+GSIERYKARLVA+GF
Sbjct: 923 EWKLAMNEELSALEHTGTWDVVPLPHHAVPITCKWVFKVKTRSNGSIERYKARLVARGFQ 982
Query: 750 QEYGMDYEETFAPVAKMTIVRMLIAVASFRQWHISQMDVKN 790
QEYG DY+ETFAPVA +T VR LIAVA+ RQW ISQMDVKN
Sbjct: 983 QEYGRDYDETFAPVAHITTVRTLIAVAATRQWEISQMDVKN 1023
>AAT47108.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1204
Score = 383 bits (984), Expect = e-114, Method: Compositional matrix adjust.
Identities = 268/755 (35%), Positives = 388/755 (51%), Gaps = 98/755 (12%)
Query: 41 PACPPYIARREEGRLVQFLMAVRSDFESIRSTILHSKPLRSIAKVVNELMAEETRLKYQA 100
P C + + R+ FL +RS++ES R+ +L P +I + + E+ +EE RL+
Sbjct: 184 PCCQRQRSHMDLRRIYDFLTRLRSEYESTRAQLLSRHPRVTIMEALTEIRSEEIRLR--- 240
Query: 101 RKNILQTPTETVLAVNSKPNQNHQNKPYTKVAMDVCSFCKQKAAVIPPSDSSGSSGSSSY 160
IL P+ +VLAV + + S + V+P S+ +Y
Sbjct: 241 EAGILPLPS-SVLAVRTVASSASSTPAVHSTVSSSSSSARPPTTVVP---STRGHLHCTY 296
Query: 161 MPKIDNVVDQFQMFQKFLAMKPHVMSSAPQGSLAPKSSSTTLDSLSDLFQRFLATQPHAL 220
K D V+ F F+K ++ S GS S + + L +R A+ A
Sbjct: 297 CDK-DGHVESF-CFRKKKDLRRGNSSKGTSGSSQKSSGGSDSQEILMLLRRLTAS---AA 351
Query: 221 SSSEGLFYLIFSSSMPSSVWILDSGASRHMSPNLSSFVSLKHISDLPVRTVDGTPMSLGG 280
+ S G S ++PS+ S + + S+ S V T DGTP+++ G
Sbjct: 352 TGSVG------SVALPSA-----QSGSAVLGSSSSTEGSSSASVPTTVHTADGTPLAIVG 400
Query: 281 IGSVVTPDLSLQNVLHVPELTLNLSFIGQLCHSRCLVLFSSTGCYVQDVQSQKLIGTG-R 339
G++ S+ V +VP+L + L GQL C V+ S C VQD ++ L+GTG R
Sbjct: 401 RGTLSISSFSVPAVSYVPKLAMQLMSAGQLTDHGCRVILDSDSCCVQDHRTGLLVGTGPR 460
Query: 340 RQGA--LYFVEELKVPDVAASTLDLSSFRLSPSSSFYLWHSRLGHVSPSRLKYLVSTSAL 397
R+ + L+ ++ L++P A ++L S+ S + SF WH RLGH+ SRL LV L
Sbjct: 461 RRDSQRLWELDWLRLPSAAPASLLAST--ASSTVSFAQWHHRLGHLCGSRLSALVRRGLL 518
Query: 398 GDLK-VKNISDCSGYKLAKFSALPFTRSLTISAKPFDLFRSDVWGPFSVPTKGGSQYYVS 456
G + +++ C G KL K LP+ S ++S +PFDL SDVWGP +KGG +YY+
Sbjct: 519 GSVSGAVSLNQCQGCKLGKQIQLPYHSSESVSKRPFDLVHSDVWGPAPFVSKGGHRYYII 578
Query: 457 FIDDCTRFCWIYLMKHRSEFYDIYQQFQALVKTQYSSTIKCFRCDLGGKYTSNKFRELLA 516
FIDD +R WIY M HRSE IY+ F +++T + S I+ FR D G+Y S + R L+
Sbjct: 579 FIDDFSRHTWIYFMTHRSEVLAIYKSFARMIRTHFDSPIRVFRADSAGEYLSRELRVFLS 638
Query: 517 MNGTVHQSSCTDTPEQNGVAERKHRHIVETARSLLLSASVPITHKFYVSRHVVFLEHIPY 576
GT+ Q SC QNGVAERKHRH++ETAR+L++++SVP P+
Sbjct: 639 EQGTLSQFSCPGAHAQNGVAERKHRHLLETARALMIASSVP-----------------PH 681
Query: 577 FSIPANANDVTPSNLIHIDPFSDVYDTSTVHVEPAAPDIFDVPLTCDVPPTPTADQALDE 636
F +++VY EP +LD
Sbjct: 682 F-------------------WAEVYSRKPRIQEP----------------------SLDA 700
Query: 637 IAHPPSRYPHRVRKSTQL-PDYVYSTFSPSFTSFLASIHCHSEPPSYKEAVVDPLWQKAM 695
P RY R R + P+ Y ++A++ +EP SY++AVV WQ AM
Sbjct: 701 SPVAPPRYNFRDRNLVTIRPEDRY--------GYVATV--LAEPCSYRDAVVHQEWQHAM 750
Query: 696 DEELSALHKTDTWALVPLPCSKRIIGSRWVYKIKTKSDGSIERYKARLVAKGFSQEYGMD 755
EEL+AL +T TW LVPLP R I +W+YK+KT+SDG++ERYKARLVA+GF QE+G D
Sbjct: 751 AEELAALERTGTWDLVPLPSHARPITCKWIYKVKTRSDGTLERYKARLVARGFQQEHGRD 810
Query: 756 YEETFAPVAKMTIVRMLIAVASFRQWHISQMDVKN 790
Y+ETFAPVA MT VR L+A+AS R +ISQ+DVKN
Sbjct: 811 YDETFAPVAHMTTVRTLLAIASARHCNISQLDVKN 845