BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g2060.1
(136 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010681731.1 PREDICTED: uncharacterized protein LOC104896659 [... 72 2e-12
ABG22008.1 retrotransposon protein, putative, Ty1-copia subclass... 71 7e-12
XP_014754065.1 PREDICTED: uncharacterized protein LOC106866053 [... 70 8e-12
>XP_010681731.1 PREDICTED: uncharacterized protein LOC104896659 [Beta vulgaris
subsp. vulgaris]
Length = 461
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Query: 7 DGERNLGPVLRSENNAAALETPILI-ITKESTNEDKEQEKRLRRKSEPVTCLMLATMEPN 65
D RNL VL+SE LE P+ T + E ++ +S VTCL+LA+M
Sbjct: 113 DWYRNLRIVLKSEMKLDVLENPLPAEPTLRPSAETRKAYDTAVARSLDVTCLLLASMNSE 172
Query: 66 LQDKFIHMDAYTMIGQLRELFQKKSRMKKYETSKAILDCRLEKAE 110
LQ +F +M+A+ +I QLR +FQK++R+++YET KAIL+ L+++E
Sbjct: 173 LQKQFENMEAFDIIHQLRAMFQKQARIERYETVKAILESSLKESE 217
>ABG22008.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 71.2 bits (173), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 7 DGERNLGPVLRSENNAAALETPIL--IITKESTNEDKEQEKRLRRKSEPVTCLMLATMEP 64
D RNL VLR E+ L P + S + +E EKR + ++CLMLATM P
Sbjct: 27 DWYRNLRIVLRQEHKEFVLTQPFPADLPNNASAAQRREHEKRCNDYLD-ISCLMLATMSP 85
Query: 65 NLQDKFIHMDAYTMIGQLRELFQKKSRMKKYETSKAILDCRL 106
LQ ++ +DA+T+I LR +F+ ++R +++ TSK++ CRL
Sbjct: 86 ELQSQYEALDAHTIITGLRNMFEDQARAERFNTSKSLFACRL 127
>XP_014754065.1 PREDICTED: uncharacterized protein LOC106866053 [Brachypodium
distachyon]
Length = 280
Score = 70.1 bits (170), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 63/102 (61%), Gaps = 9/102 (8%)
Query: 14 PVLRSENNAAALETPILIITKESTNEDK-----EQEKRLRRKSEPVTCLMLATMEPNLQD 68
PVL+ E L+TP+ + +ED ++ R +S ++CLMLA MEP+LQ
Sbjct: 24 PVLKQEKKDHVLDTPL----PDEPDEDATVAVMNAHRKARDESTEISCLMLAHMEPDLQQ 79
Query: 69 KFIHMDAYTMIGQLRELFQKKSRMKKYETSKAILDCRLEKAE 110
+F +++AY MI L+ +FQ +++ ++Y+ S+A+L C+L+ +
Sbjct: 80 QFENVEAYDMIESLKSMFQAQAKTERYQVSQALLGCKLKDGD 121