BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000034.1_g2290.1
         (103 letters)

Database: ./nr 
           95,329,361 sequences; 35,143,497,570 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CAE04999.2 OSJNBb0093G06.7 [Oryza sativa Japonica Group]               66   2e-10
AAP44605.1 putative polyprotein [Oryza sativa Japonica Group]          65   2e-10
ABF97047.1 retrotransposon protein, putative, Ty1-copia subclass...    65   2e-10

>CAE04999.2 OSJNBb0093G06.7 [Oryza sativa Japonica Group]
          Length = 923

 Score = 65.9 bits (159), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 42/52 (80%), Gaps = 1/52 (1%)

Query: 53  ARLIELSQRQ-ELLLIEDNEPSTYKEAMTSPDSEKWLGAMKSEMESISENQV 103
           AR   L+ RQ ++LL++++EP+TY+E M  PDSEKWLGAMKSE+ES+  NQV
Sbjct: 658 ARYALLTIRQRDILLLDNDEPTTYEETMVGPDSEKWLGAMKSEIESMHVNQV 709


>AAP44605.1 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1161

 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/59 (52%), Positives = 45/59 (76%), Gaps = 2/59 (3%)

Query: 45  VVRAPCGSARLIELSQRQELLLIEDNEPSTYKEAMTSPDSEKWLGAMKSEMESISENQV 103
           + R P   A L   S ++++LL++++EP+TY+EAM  PD+EKWLGAMKSE+ES+  NQV
Sbjct: 632 IRRTPARYALLT--SGQRDILLLDNDEPTTYEEAMVGPDTEKWLGAMKSEIESMHVNQV 688


>ABF97047.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1248

 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/59 (52%), Positives = 45/59 (76%), Gaps = 2/59 (3%)

Query: 45  VVRAPCGSARLIELSQRQELLLIEDNEPSTYKEAMTSPDSEKWLGAMKSEMESISENQV 103
           + R P   A L   S ++++LL++++EP+TY+EAM  PD+EKWLGAMKSE+ES+  NQV
Sbjct: 719 IRRTPARYALLT--SGQRDILLLDNDEPTTYEEAMVGPDTEKWLGAMKSEIESMHVNQV 775


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