BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000038.1_g0020.1
(88 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAN68884.1 hypothetical protein VITISV_039230 [Vitis vinifera] 93 1e-21
XP_010692517.1 PREDICTED: uncharacterized protein LOC104905624 [... 97 2e-21
XP_011624386.1 PREDICTED: cellulose synthase-like protein H1 [Am... 94 1e-20
>CAN68884.1 hypothetical protein VITISV_039230 [Vitis vinifera]
Length = 220
Score = 92.8 bits (229), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
Query: 1 MGNDAPCKVVGIGTIQIKMHDGDVRTITDIRHVPDLKRNLMSLGTLDDNGCKYVGEGDFF 60
MGND CKVVGI TI+IKM+DG +RT+TD+RHVP LK+NL+SLGTLD NGC Y EG
Sbjct: 99 MGNDEACKVVGIDTIRIKMYDGFIRTLTDVRHVPKLKKNLISLGTLDSNGCTYKAEGGVL 158
Query: 61 DNVRKNNLINLFRNMKIN 78
+ K L+ + + KIN
Sbjct: 159 -RISKGALV-VMKGKKIN 174
>XP_010692517.1 PREDICTED: uncharacterized protein LOC104905624 [Beta vulgaris
subsp. vulgaris]
Length = 2676
Score = 96.7 bits (239), Expect = 2e-21, Method: Composition-based stats.
Identities = 39/64 (60%), Positives = 53/64 (82%)
Query: 1 MGNDAPCKVVGIGTIQIKMHDGDVRTITDIRHVPDLKRNLMSLGTLDDNGCKYVGEGDFF 60
MGN+A CKVVGIG++ I M DG VRT++ +RHVP++K+NL+SLGTLD+NGCKY+ EG
Sbjct: 322 MGNNATCKVVGIGSVDITMFDGTVRTLSKVRHVPEMKKNLISLGTLDNNGCKYIAEGGVL 381
Query: 61 DNVR 64
+ +R
Sbjct: 382 NVIR 385
>XP_011624386.1 PREDICTED: cellulose synthase-like protein H1 [Amborella
trichopoda]
Length = 923
Score = 94.0 bits (232), Expect = 1e-20, Method: Composition-based stats.
Identities = 42/69 (60%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 1 MGNDAPCKVVGIGTIQIKMHDGDVRTITDIRHVPDLKRNLMSLGTLDDNGCKYVGEGDFF 60
MGND K +G+GT IKM+DG VRT+TD+RH+PDLK+NL+SLGTLD N CK+VGEG
Sbjct: 730 MGNDTAWKTIGVGTSTIKMYDGVVRTLTDVRHIPDLKKNLISLGTLDSNDCKFVGEGGVL 789
Query: 61 DNVRKNNLI 69
N+ K L+
Sbjct: 790 -NILKGALV 797