BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000042.1_g0290.1
(482 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_013660003.1 PREDICTED: uncharacterized protein LOC106365095 [... 139 2e-33
XP_009138440.1 PREDICTED: uncharacterized protein LOC103862484 [... 138 6e-33
XP_009150009.1 PREDICTED: uncharacterized protein LOC103873346 [... 133 8e-32
>XP_013660003.1 PREDICTED: uncharacterized protein LOC106365095 [Brassica napus]
Length = 390
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 148/323 (45%), Gaps = 46/323 (14%)
Query: 11 PISAVTNFITEKLDDSNYLMWRDQVETMLKTYDLIGFVNGSFEEP-PQLRFIQG---IEQ 66
P ++T+ +T KL +NYL+W+ Q E+ L + L+GFVNG P P + G EQ
Sbjct: 10 PSLSITHCVTLKLSSTNYLLWKTQFESFLSSQSLLGFVNGGSVRPSPTVTVRNGDEVTEQ 69
Query: 67 VNPDFQNWRSKESFVMSFLKSTLSKSIYYDIYGLQSAKEIWEYLDLTNNEGLESKKDQLR 126
NP+F W K+ VM++L +L++ +YGL SA+E+W L N ++K L+
Sbjct: 70 ANPEFGKWVKKDQLVMAWLFGSLTEEALRSVYGLHSAQEVWFSLGKKYNRVSATRKLDLQ 129
Query: 127 RKLQTVKKGDASIAEYLREIKHISDSLMTVHDRVSDSELVRIALNGLSSDYDQFTTA--- 183
RKLQ + KG ++++YL ++K I D L ++ +S+ E++ AL GL +Y+ T
Sbjct: 130 RKLQGMAKGSKTMSQYLSDVKSICDQLDSIGCPLSEQEVIYGALGGLGKEYESICTVIEH 189
Query: 184 ------LRAHNEILSLAQLKSRLTQHEQWLSSKDYVHEAYYINKSNQKQGLRTKPSPSYY 237
L + + L +L Q ++ H A++ + +G + Y
Sbjct: 190 SMDTAELSFEDAVFKLTNFDDKLQAQSQ--PTETSPHMAFHAGRGYSNRGRGSGTYRGGY 247
Query: 238 RNVASNQKRDVPVPVNTQHKSQRAEDF---------DFSSIPCGICKRWGHSAGVCYFRY 288
R S Q S R F + S C IC R+GHSA CY R+
Sbjct: 248 RGRGS------------QSYSTRGRGFQQQFTGGSNNNSRPTCQICGRYGHSAARCYNRF 295
Query: 289 KPNNIKPHSGYHTEEQPENLESS 311
E PENL ++
Sbjct: 296 D----------QEYESPENLHNA 308
>XP_009138440.1 PREDICTED: uncharacterized protein LOC103862484 [Brassica rapa]
Length = 392
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 144/289 (49%), Gaps = 14/289 (4%)
Query: 15 VTNFITEKLDDSNYLMWRDQVETMLKTYDLIGFVNGSFEEPPQLRFI----QGIEQVNPD 70
+ +T KL D NYL+W+ Q E L + L+G+V+GS P Q + Q +E NP+
Sbjct: 15 INQCVTLKLKDDNYLLWKLQFEQFLASQMLLGYVDGSKPRPAQTMTVRQEDQVVEAANPE 74
Query: 71 FQNWRSKESFVMSFLKSTLSKSIYYDIYGLQSAKEIWEYLDLTNNEGLESKKDQLRRKLQ 130
F W K+ +M+++ TLS++ +YGL +++E+W L N ++K L+RK+Q
Sbjct: 75 FMKWVQKDQLIMAWIYGTLSETALRSVYGLHTSQEVWFSLGQKYNRVSATRKLALQRKIQ 134
Query: 131 TVKKGDASIAEYLREIKHISDSLMTVHDRVSDSELVRIALNGLSSDYDQFTTALRAHNEI 190
T+ KG ++A YL EIK + D L ++ + +SE + LNGL +Y+ T + +
Sbjct: 135 TLTKGTKTMAVYLAEIKTLCDQLDSIGAPIPESEKIFGVLNGLGREYESICTVVENSMDA 194
Query: 191 L---SLAQLKSRLTQHEQW-----LSSKDYVHEAYYINKSNQKQGLRTKPSPSYYRNVAS 242
L SL + ++LT E +S++ H+A+Y ++ R + Y S
Sbjct: 195 LPAPSLDDVMAKLTAFEDKVQAYSVSNEVVPHQAFYTDRGGYYGRGRGQHRGGYRGRGYS 254
Query: 243 NQKRDVPVPVNTQHKSQRAEDFDFSSIPCGICKRWGHSAGVCYFRYKPN 291
Q R R+ S C IC R+GHSA CY R+ P+
Sbjct: 255 TQGRGFYQQFG--QTGGRSSQNSSSRPTCQICGRFGHSAFKCYKRFDPH 301
>XP_009150009.1 PREDICTED: uncharacterized protein LOC103873346 [Brassica rapa]
Length = 318
Score = 133 bits (335), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 143/289 (49%), Gaps = 17/289 (5%)
Query: 15 VTNFITEKLDDSNYLMWRDQVETMLKTYDLIGFVNGSFEEPPQLRFIQGIEQV----NPD 70
+T +T KL D NYL+W+ Q E L + L+G+VNG P + ++ +QV NP+
Sbjct: 15 ITQCVTLKLKD-NYLLWKLQFEQFLSSQMLLGYVNGGHPRPAETITVREGDQVTKAANPE 73
Query: 71 FQNWRSKESFVMSFLKSTLSKSIYYDIYGLQSAKEIWEYLDLTNNEGLESKKDQLRRKLQ 130
F W K+ +M+++ TL+++ +YGL S++E+W L N ++K L+RK+Q
Sbjct: 74 FLKWVQKDQLIMAWIYGTLTENALRSVYGLHSSQEVWSTLGQKFNRVSATRKLALQRKIQ 133
Query: 131 TVKKGDASIAEYLREIKHISDSLMTVHDRVSDSELVRIALNGLSSDYDQFTTALRAHNEI 190
T+ KG+ ++A YL EIK + D L ++ + +SE + LNGL +Y+ T + +
Sbjct: 134 TMAKGNKTMAVYLSEIKSLCDQLDSIGSAIPESEKIFGVLNGLGKEYESICTVIENTMDA 193
Query: 191 L---SLAQLKSRLTQHEQWL-----SSKDYVHEAYYINKSNQKQGLRTKPSPSYYRNVAS 242
+ +L + +L E L SS H+AYY N+ R + Y S
Sbjct: 194 IPAPTLDDVMPKLISFEDKLQTYTVSSNVTPHQAYYTNRGGYSG--RGQYRGGYRGRGYS 251
Query: 243 NQKRDVPVPVNTQHKSQRAEDFDFSSIPCGICKRWGHSAGVCYFRYKPN 291
Q R S R + S C IC ++GHSA CY RY N
Sbjct: 252 TQGRGFHQQFG--QTSGRGQHQSSSRPTCQICGKFGHSAFRCYQRYDEN 298