BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000042.1_g0320.1
(252 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAN65222.1 hypothetical protein VITISV_038665 [Vitis vinifera] 253 1e-73
KYP63308.1 Retrovirus-related Pol polyprotein from transposon TN... 238 2e-72
KYP48029.1 Retrovirus-related Pol polyprotein from transposon TN... 238 3e-71
>CAN65222.1 hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 253 bits (646), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 146/302 (48%), Positives = 183/302 (60%), Gaps = 53/302 (17%)
Query: 1 MQFYGNEFNRFCVDEGIVRHHTVRKTPQQNGVA----------------NAGLPEVFWAE 44
++F +F+ FC EGIVRH TVR TPQQNGVA +AGL + FWAE
Sbjct: 663 LEFCNKDFDEFCRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRARCMRIDAGLSKKFWAE 722
Query: 45 AVNTAAYLVNISPCTSIKCKTPNEVWSGYPGNYENLRIFGCSAYAHVKEGKLDPRAKKCV 104
AVNTAAYLVN SP T+I KTP EVWSG P NY L+IFGC AYAHV +GKL+PRA KC+
Sbjct: 723 AVNTAAYLVNRSPSTAIDFKTPQEVWSGKPSNYSGLKIFGCPAYAHVSDGKLEPRAMKCI 782
Query: 105 FLGYEPGVKGYRLWNLDVKSN--LVSRDITFDELAM-----------------------V 139
FLGY GVKGYRLW + ++ ++SRD+TFDE AM V
Sbjct: 783 FLGYATGVKGYRLWCTEDRTPKFIISRDVTFDESAMFGQRKEFGDLAGTSKTDLGANQKV 842
Query: 140 EFEIDTPVEVRPQVDEQAEEDEPELVH---YSVARIRGGRDIREPERY------GMADMV 190
EFE+D P+E VD+ +EE +P + S+A R R+IR P RY + + V
Sbjct: 843 EFEVDAPME--NGVDDTSEE-QPVIDQNDSQSIAAHRPRREIRRPMRYVDCVSANITNPV 899
Query: 191 AFALSVGESIDGGEPYTYEEAMRSDDSRQWSLAMNEEIGSLRKNQVRELTEQPKGQKIVG 250
AFAL+V E I EP +Y+EAM S DS++W +M++E+ SLRKNQ EL P+G K V
Sbjct: 900 AFALAVAEEIGREEPRSYKEAMESKDSKKWLSSMDDEMASLRKNQTWELVPLPEGVKPVD 959
Query: 251 NK 252
K
Sbjct: 960 CK 961
>KYP63308.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 516
Score = 238 bits (608), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 128/299 (42%), Positives = 178/299 (59%), Gaps = 47/299 (15%)
Query: 1 MQFYGNEFNRFCVDEGIVRHHTVRKTPQQNGVA----------------NAGLPEVFWAE 44
++F +F++FC + G+ RH TVR TPQ+NG+ +AGLP+ FWAE
Sbjct: 92 LEFCDEKFSKFCRENGVARHKTVRGTPQKNGLVERFNRTILERVRCMLNHAGLPKSFWAE 151
Query: 45 AVNTAAYLVNISPCTSIKCKTPNEVWSGYPGNYENLRIFGCSAYAHVKEGKLDPRAKKCV 104
AV++A Y +N P T+++ KTP EVWSG +Y LR+FGC AYAH+K+ KL+PRA K +
Sbjct: 152 AVSSAVYCINRCPSTALEFKTPQEVWSGRKVDYSELRVFGCIAYAHIKQDKLEPRALKFI 211
Query: 105 FLGYEPGVKGYRLWNLD--VKSNLVSRDITFDELAM-----------------------V 139
F+GY GVKGYRLW L+ K L+SRD+ F+E+ M V
Sbjct: 212 FIGYPEGVKGYRLWCLEPGYKKCLISRDVVFNEIEMANLVKPSKVEIHEKSQDQTIKIEV 271
Query: 140 EFEIDTPVEVRPQ-----VDEQAEEDEPELVHYSVARIRGGRDIREPERYGMADMVAFAL 194
EF + T + Q + ++ +++E + YS+AR R R + P+RYG AD+V+FA
Sbjct: 272 EFTVITEAKAATQRQQHILQQELDDEERSIQSYSLARDRERRAHKAPQRYGHADLVSFAF 331
Query: 195 SVGESI-DGGEPYTYEEAMRSDDSRQWSLAMNEEIGSLRKNQVRELTEQPKGQKIVGNK 252
+VG + D EP +Y EAMRS D W AM EE+GSL KNQ L ++PK QKIVG+K
Sbjct: 332 TVGLDLEDHDEPKSYSEAMRSKDKNSWLKAMKEEMGSLEKNQTWILVDKPKEQKIVGSK 390
>KYP48029.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 634
Score = 238 bits (608), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 128/299 (42%), Positives = 178/299 (59%), Gaps = 47/299 (15%)
Query: 1 MQFYGNEFNRFCVDEGIVRHHTVRKTPQQNGVA----------------NAGLPEVFWAE 44
++F +F++FC + G+ RH TVR TPQ+NG+A +AGLP+ FW E
Sbjct: 210 LEFCDEKFSKFCRENGVARHKTVRGTPQKNGLAERFNRTILERVRCMLNHAGLPKSFWVE 269
Query: 45 AVNTAAYLVNISPCTSIKCKTPNEVWSGYPGNYENLRIFGCSAYAHVKEGKLDPRAKKCV 104
AV++A Y +N P T+++ KTP EVWSG +Y LR+FGC AYAH+K+ KL+PRA K +
Sbjct: 270 AVSSAVYCINRCPSTALEFKTPQEVWSGRKVDYSELRVFGCIAYAHIKQDKLEPRALKFI 329
Query: 105 FLGYEPGVKGYRLWNLD--VKSNLVSRDITFDELAM-----------------------V 139
F+GY GVKGYRLW L+ K L+SRD+ F+E+ M V
Sbjct: 330 FIGYPEGVKGYRLWCLEPGYKKCLISRDVVFNEIEMANLVKPSKVEIHEKSQDQTIKIEV 389
Query: 140 EFEIDTPVEVRPQ-----VDEQAEEDEPELVHYSVARIRGGRDIREPERYGMADMVAFAL 194
EF + T + Q + ++ +++E + YS+AR R R + P+RYG AD+V+FA
Sbjct: 390 EFTVITEAKAATQRQQHILQQELDDEERSIQSYSLARDRERRAHKAPQRYGHADLVSFAF 449
Query: 195 SVGESI-DGGEPYTYEEAMRSDDSRQWSLAMNEEIGSLRKNQVRELTEQPKGQKIVGNK 252
+VG + D EP +Y EAMRS D W AM EE+GSL KNQ L ++PK QKIVG+K
Sbjct: 450 TVGLDLEDHDEPKSYSEAMRSKDKNSWLKAMKEEMGSLEKNQTWILVDKPKEQKIVGSK 508