BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000042.1_g0340.1
         (132 letters)

Database: ./nr 
           95,329,361 sequences; 35,143,497,570 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KYP42039.1 Retrovirus-related Pol polyprotein from transposon TN...   179   1e-52
AAK70406.1 pol polyprotein [Citrus x paradisi]                        175   3e-52
KYP53356.1 Retrovirus-related Pol polyprotein from transposon TN...   179   2e-51

>KYP42039.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 394

 Score =  179 bits (454), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 78/129 (60%), Positives = 106/129 (82%)

Query: 1   MFTLCGNAISWRAVLQSVVALSTTEAGYMEATEAVKEAIWLSGFVQDLGLKQEVTEVYCD 60
           +FTLC +AISW+A LQS+ ALSTTEA Y+ ATE VKEA+W+ G V++LGL Q+V  V+CD
Sbjct: 263 IFTLCNSAISWKASLQSIAALSTTEAEYVSATEGVKEALWIRGLVKELGLTQDVLTVFCD 322

Query: 61  NQSAIHFTKNQMYHERTKHIDIKYHFIKDVIEQGKITMKKVSTTENPADMLTKAVTNFKF 120
           +QSAIH TKN  YH++TKHID+K+HFI+D++  G++ ++KV T+ENPADMLTK + N KF
Sbjct: 323 SQSAIHLTKNSRYHDKTKHIDVKHHFIRDIVTIGEVLLQKVHTSENPADMLTKPLPNAKF 382

Query: 121 KHWLDLIGI 129
           +H L L+G+
Sbjct: 383 QHCLGLVGL 391


>AAK70406.1 pol polyprotein [Citrus x paradisi]
          Length = 297

 Score =  175 bits (444), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 79/131 (60%), Positives = 102/131 (77%)

Query: 1   MFTLCGNAISWRAVLQSVVALSTTEAGYMEATEAVKEAIWLSGFVQDLGLKQEVTEVYCD 60
           +FTL G ++SWR++LQS +ALSTTEA Y+ ATEAVKEAIWL G + DLG+ QE   V+CD
Sbjct: 165 VFTLGGGSVSWRSILQSTIALSTTEAEYIAATEAVKEAIWLKGLLGDLGVIQENIAVFCD 224

Query: 61  NQSAIHFTKNQMYHERTKHIDIKYHFIKDVIEQGKITMKKVSTTENPADMLTKAVTNFKF 120
           NQSAI   KNQ YH RTKHID+KYH+++++IE G + +KK+ T +NP+DMLTK V+  KF
Sbjct: 225 NQSAIFLAKNQTYHARTKHIDVKYHYVREIIEGGDVLLKKIDTKDNPSDMLTKVVSEVKF 284

Query: 121 KHWLDLIGISR 131
           +H L LI I R
Sbjct: 285 QHCLKLIQILR 295


>KYP53356.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 503

 Score =  179 bits (453), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 78/129 (60%), Positives = 106/129 (82%)

Query: 1   MFTLCGNAISWRAVLQSVVALSTTEAGYMEATEAVKEAIWLSGFVQDLGLKQEVTEVYCD 60
           +FTLC +AISW+A LQS+ ALSTTEA Y+ ATE VKEA+W+ G V++LGL Q+V  V+CD
Sbjct: 372 IFTLCNSAISWKASLQSIAALSTTEAEYVSATEGVKEALWIRGLVKELGLTQDVLTVFCD 431

Query: 61  NQSAIHFTKNQMYHERTKHIDIKYHFIKDVIEQGKITMKKVSTTENPADMLTKAVTNFKF 120
           +QSAIH TKN  YH++TKHID+K+HFI+D++  G++ ++KV T+ENPADMLTK + N KF
Sbjct: 432 SQSAIHLTKNSRYHDKTKHIDVKHHFIRDIVTIGEVLLQKVHTSENPADMLTKPLPNAKF 491

Query: 121 KHWLDLIGI 129
           +H L L+G+
Sbjct: 492 QHCLGLVGL 500

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