BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g0270.1
(1468 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010254581.1 PREDICTED: pentatricopeptide repeat-containing pr... 989 0.0
XP_009364803.1 PREDICTED: pentatricopeptide repeat-containing pr... 922 0.0
XP_010646445.1 PREDICTED: pentatricopeptide repeat-containing pr... 917 0.0
>XP_010254581.1 PREDICTED: pentatricopeptide repeat-containing protein At5g65570
[Nelumbo nucifera]
Length = 719
Score = 989 bits (2558), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/721 (65%), Positives = 575/721 (79%), Gaps = 15/721 (2%)
Query: 748 RFSNFTLRRTLQTVSLTHENHLNLAPCFDLNIEFPPFNGKTQTQIFDSYVDLIRKCRERK 807
RF NF V++ E L+P + L + P F+ D+YV L+R+C E K
Sbjct: 14 RFWNFF-------VNINVEASSQLSP-YGLAVTTPHFDR-------DAYVSLLRQCVEGK 58
Query: 808 SVAKLRSIHLHMKKSGFPLLSLGNKLVDAYIKCDSVDDARKLFDEMPHRHVVIWNSMIST 867
+A++R++HLHM KSGFPLLSLGNKLVDAY+KC +DDAR+LFDEMP RH+V WNS+IS
Sbjct: 59 CIAQIRNVHLHMIKSGFPLLSLGNKLVDAYLKCGGLDDARRLFDEMPQRHIVTWNSIISA 118
Query: 868 YVRQKRSDEAIELYGRMILEGIIADEFTYSSIFKAFSDTGLLREGQKAHGRLLVSGLEVS 927
Y+RQ+RS EA+ LY RM+++G+IADEFTYSS+F+AFSD GLLREG+KAHGRL+V GLE S
Sbjct: 119 YIRQRRSTEAVMLYERMLVDGVIADEFTYSSVFRAFSDLGLLREGRKAHGRLVVLGLEAS 178
Query: 928 NVFVGSALVDMYAKFGKLRDARVVSDQIVEKDVVLVTALIVGYTQNGEDGEALEIFRDMV 987
NV+VGSALVDMYAKFGKLRDA +VS++++EKDVVL+TALIVGYTQNG D +AL++F MV
Sbjct: 179 NVYVGSALVDMYAKFGKLRDAHLVSERVLEKDVVLLTALIVGYTQNGGDAKALDVFASMV 238
Query: 988 KEGIRANDFTLASILTACGNLANMDTGKQVHGLLIKYGFEWAVESRTSLLTMYSKCGMID 1047
K+GI+ N+FT ASIL ACGNL ++ GK +H +IK GFE V S+TSL+ MYSKCG+ID
Sbjct: 239 KDGIKPNEFTFASILIACGNLEDVQRGKSIHCHVIKSGFEDKVSSQTSLVAMYSKCGLID 298
Query: 1048 DSLKVFDGFFNANLVSWTALVMGLVQNGRAESALSSFCEMIRNSIIPNAFTLSTVLRACS 1107
DSLKVFD NAN V+WTA + GLVQNGR ESAL +M+R+S PNAFTLST LRACS
Sbjct: 299 DSLKVFDRSINANQVTWTAQIAGLVQNGREESALLMLRQMLRSSTNPNAFTLSTALRACS 358
Query: 1108 IQAMLTEGQQLQGLILKMGFDKNRFVGSALIDMYGKCGIIEMARSIFDDLNEVDVVSVNS 1167
AM +G+Q+ L++K G D +RF +AL+DMYGKCG +E AR +FD L E+DVV VNS
Sbjct: 359 SLAMFEQGKQVHSLVMKSGLDTDRFTVAALVDMYGKCGCVETARLVFDGLVELDVVVVNS 418
Query: 1168 MIFGYALGGSGEEAIKLFDQMEELGVRPNDGTFTSVLYACTNAGLLEEGRRIFSSMKRNP 1227
MI+ +A GG G EA+KLFD+M +LG+ PND T+ + L AC+N+GLLEEG RIFSS+ NP
Sbjct: 419 MIYSFAQGGYGHEALKLFDRMPDLGLHPNDVTYVNALSACSNSGLLEEGHRIFSSIHSNP 478
Query: 1228 EINISRDHYTCMIDLLGRAGKLEEAETLLNQIQNPDVVLWRTLLSSCKIHGEVEMAERLM 1287
I +S DHYT M+DLLGRAG+LEEAE L+ Q++NPDVVLWRTLLS+C+IHGE EMA R
Sbjct: 479 RIELSIDHYTSMVDLLGRAGRLEEAEKLIMQVKNPDVVLWRTLLSACRIHGEAEMARRAA 538
Query: 1288 NHIIELEPGDEGAHVLLSNIYASTGNWDEVTKMKITMKEMKLKKNPAMSWTEVDGEVHTF 1347
N ++EL+PGDEG HVLLSNIYAS GNW EV KMK TM+E++LKKNPAMSW + EVHTF
Sbjct: 539 NCVLELDPGDEGTHVLLSNIYASAGNWSEVVKMKSTMRELRLKKNPAMSWVVANEEVHTF 598
Query: 1348 MAGDLSHPRAMEIDKELRELRDKIEGLGYTPDTRFVLQDLDEIEKERSIYYHSEKIAIAF 1407
MAGD SHPR+MEI + E+ KI+ +GY PDTRFVLQDL E EKE+S+ +HSEK+AIAF
Sbjct: 599 MAGDWSHPRSMEIYAMIEEVMVKIKVMGYVPDTRFVLQDLAENEKEKSLSHHSEKLAIAF 658
Query: 1408 GILSSKKKNTCIRIFKNLRVCGDCHTWIKFVSKVIGREVIARDAKRFHHFKDGLCSCGDY 1467
+LSS TCIRIFKNLRVCGDCHTWIKFVS+++GRE+IARDAKRFHHFKDG CSCGDY
Sbjct: 659 ALLSSSNGKTCIRIFKNLRVCGDCHTWIKFVSRIVGREIIARDAKRFHHFKDGFCSCGDY 718
Query: 1468 W 1468
W
Sbjct: 719 W 719
>XP_009364803.1 PREDICTED: pentatricopeptide repeat-containing protein At5g65570
[Pyrus x bretschneideri]
Length = 715
Score = 922 bits (2383), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/743 (58%), Positives = 573/743 (77%), Gaps = 30/743 (4%)
Query: 728 MEGWKFRIKSILI-FSVIAQRRFSNFTLRRTLQTVSLTHENHLNLAPCFDLNIEFPPFNG 786
M W R+ ++LI F + RR S NHLN N
Sbjct: 1 MAVWLPRLSNLLISFEMNLPRRLSQL--------------NHLN--------------NF 32
Query: 787 KTQTQIF-DSYVDLIRKCRERKSVAKLRSIHLHMKKSGFPLLSLGNKLVDAYIKCDSVDD 845
+ +Q F + Y LI++C +S+ + + HM KSG LS+GNKLVDA +KC S+
Sbjct: 33 TSSSQSFTEFYSSLIQQCIHTRSLMDVGIVQTHMIKSGCIHLSVGNKLVDAGLKCGSISY 92
Query: 846 ARKLFDEMPHRHVVIWNSMISTYVRQKRSDEAIELYGRMILEGIIADEFTYSSIFKAFSD 905
AR+LFDE+P RHVVIWNSMIS+YV +K+S EAI LY +M+L+G+ DEFT+SS+FKAF +
Sbjct: 93 ARELFDELPERHVVIWNSMISSYVGRKKSKEAIGLYEKMVLDGVFPDEFTFSSLFKAFCN 152
Query: 906 TGLLREGQKAHGRLLVSGLEVSNVFVGSALVDMYAKFGKLRDARVVSDQIVEKDVVLVTA 965
GL+ EG++AHG +V GLEVSNVFV SALVDMY KFG+++D R+V++++V+KDVVL T
Sbjct: 153 LGLVNEGRRAHGLAVVLGLEVSNVFVASALVDMYVKFGRMKDGRLVANRVVDKDVVLFTT 212
Query: 966 LIVGYTQNGEDGEALEIFRDMVKEGIRANDFTLASILTACGNLANMDTGKQVHGLLIKYG 1025
LIVGY+Q+G+DGEAL++FR+M+KEGI+AN++T ASIL +CGNL ++ GK VHGL IK G
Sbjct: 213 LIVGYSQHGDDGEALDVFRNMIKEGIKANEYTFASILISCGNLDDLSNGKVVHGLAIKSG 272
Query: 1026 FEWAVESRTSLLTMYSKCGMIDDSLKVFDGFFNANLVSWTALVMGLVQNGRAESALSSFC 1085
E AV S+TSLLTMY++CG+IDDSL+VF GF N N V+WT+L++GLV+NGR E AL+ F
Sbjct: 273 SELAVASQTSLLTMYARCGLIDDSLRVFKGFLNPNQVTWTSLIVGLVRNGREELALTKFR 332
Query: 1086 EMIRNSIIPNAFTLSTVLRACSIQAMLTEGQQLQGLILKMGFDKNRFVGSALIDMYGKCG 1145
+MIR+SI+PN+FTLS+ L+ACS AM+ EG+Q+ ++ K G D++ + G+ALI++YGKCG
Sbjct: 333 KMIRSSIVPNSFTLSSALQACSSLAMIVEGKQIHAMVTKFGLDRDIYAGAALINLYGKCG 392
Query: 1146 IIEMARSIFDDLNEVDVVSVNSMIFGYALGGSGEEAIKLFDQMEELGVRPNDGTFTSVLY 1205
EMARS+FDDL E+DVVS+NSMI+ YA G G EA+ LF+ M++LG+ PN+ T SVL
Sbjct: 393 STEMARSVFDDLIEIDVVSMNSMIYSYAQNGFGHEALLLFNGMKDLGLEPNEVTILSVLL 452
Query: 1206 ACTNAGLLEEGRRIFSSMKRNPEINISRDHYTCMIDLLGRAGKLEEAETLLNQIQNPDVV 1265
AC N+GL++EG +IF+++ N I ++ DHY CM+DLLGR+G+L+EAE L+ Q++NPDVV
Sbjct: 453 ACNNSGLVQEGCQIFATVTNNHNIELTVDHYACMVDLLGRSGRLQEAEALVKQVRNPDVV 512
Query: 1266 LWRTLLSSCKIHGEVEMAERLMNHIIELEPGDEGAHVLLSNIYASTGNWDEVTKMKITMK 1325
LWRTL+S+CK+HGE+EMAER N ++EL PGD G+H+LL+N+YASTGNW +V MK TM+
Sbjct: 513 LWRTLISACKLHGEIEMAERASNKMLELAPGDGGSHILLTNVYASTGNWSQVIGMKSTMR 572
Query: 1326 EMKLKKNPAMSWTEVDGEVHTFMAGDLSHPRAMEIDKELRELRDKIEGLGYTPDTRFVLQ 1385
+MK KKNPAMSW +VD EVHTFMAGDLSHPR EI++ L L D ++ LGY PDTRFVLQ
Sbjct: 573 DMKFKKNPAMSWVDVDREVHTFMAGDLSHPRLREINEMLENLTDGVKILGYIPDTRFVLQ 632
Query: 1386 DLDEIEKERSIYYHSEKIAIAFGILSSKKKNTCIRIFKNLRVCGDCHTWIKFVSKVIGRE 1445
DLDE K+RS++ HSEK+AI+F +L S K+T IRI+KNLRVCGDCH+WIKFV+KV+GRE
Sbjct: 633 DLDEEHKKRSLHSHSEKLAISFALLMSSNKDTVIRIYKNLRVCGDCHSWIKFVTKVVGRE 692
Query: 1446 VIARDAKRFHHFKDGLCSCGDYW 1468
+IARDAKRFHHFKDG CSCGDYW
Sbjct: 693 IIARDAKRFHHFKDGFCSCGDYW 715
>XP_010646445.1 PREDICTED: pentatricopeptide repeat-containing protein At5g65570
[Vitis vinifera]
Length = 752
Score = 917 bits (2371), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/684 (61%), Positives = 551/684 (80%), Gaps = 1/684 (0%)
Query: 785 NGKTQTQIFDSYVDLIRKCRERKSVAKLRSIHLHMKKSGFPLLSLGNKLVDAYIKCDSVD 844
NG + ++ Y LI++C KS+ + I H K GF SLGNKL+DAY+KC SV
Sbjct: 70 NGASFSESLQLYSSLIQQCIGIKSITDITKIQSHALKRGFHH-SLGNKLIDAYLKCGSVV 128
Query: 845 DARKLFDEMPHRHVVIWNSMISTYVRQKRSDEAIELYGRMILEGIIADEFTYSSIFKAFS 904
ARK+FDE+PHRH+V WNSMI++Y+R RS EAI++Y RM+ +GI+ DEFT+SS+FKAFS
Sbjct: 129 YARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFS 188
Query: 905 DTGLLREGQKAHGRLLVSGLEVSNVFVGSALVDMYAKFGKLRDARVVSDQIVEKDVVLVT 964
D GL+ EGQ+AHG+ +V G+ VSNVFVGSALVDMYAKFGK+RDAR+VSDQ+V KDVVL T
Sbjct: 189 DLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFT 248
Query: 965 ALIVGYTQNGEDGEALEIFRDMVKEGIRANDFTLASILTACGNLANMDTGKQVHGLLIKY 1024
ALIVGY+ +GEDGE+L++FR+M K+GI AN++TL+S+L CGNL ++ +G+ +HGL++K
Sbjct: 249 ALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKA 308
Query: 1025 GFEWAVESRTSLLTMYSKCGMIDDSLKVFDGFFNANLVSWTALVMGLVQNGRAESALSSF 1084
G E AV S+TSLLTMY +CG++DDSLKVF F N N V+WT++++GLVQNGR E AL F
Sbjct: 309 GLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKF 368
Query: 1085 CEMIRNSIIPNAFTLSTVLRACSIQAMLTEGQQLQGLILKMGFDKNRFVGSALIDMYGKC 1144
+M+R+SI PN+FTLS+VLRACS AML +G+Q+ +++K G D +++VG+ALID YGKC
Sbjct: 369 RQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKC 428
Query: 1145 GIIEMARSIFDDLNEVDVVSVNSMIFGYALGGSGEEAIKLFDQMEELGVRPNDGTFTSVL 1204
G E+ARS+F+ L EVDVVSVNSMI+ YA G G EA++LF M++ G+ PN+ T+ VL
Sbjct: 429 GSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVL 488
Query: 1205 YACTNAGLLEEGRRIFSSMKRNPEINISRDHYTCMIDLLGRAGKLEEAETLLNQIQNPDV 1264
AC NAGLLEEG IFSS + + I +++DHY CM+DLLGRAG+L+EAE L+NQ+ DV
Sbjct: 489 SACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNISDV 548
Query: 1265 VLWRTLLSSCKIHGEVEMAERLMNHIIELEPGDEGAHVLLSNIYASTGNWDEVTKMKITM 1324
V+WRTLLS+C+IHG+VEMA+R+MN +I+L P D G HVLLSN+YASTGNW +V +MK M
Sbjct: 549 VIWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAM 608
Query: 1325 KEMKLKKNPAMSWTEVDGEVHTFMAGDLSHPRAMEIDKELRELRDKIEGLGYTPDTRFVL 1384
+EM+LKKNPAMSW +V+ E+HTFMAGD SHP +I ++L EL +K++ LGY PDTRFVL
Sbjct: 609 REMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEELIEKVKELGYVPDTRFVL 668
Query: 1385 QDLDEIEKERSIYYHSEKIAIAFGILSSKKKNTCIRIFKNLRVCGDCHTWIKFVSKVIGR 1444
QDLDE +K RS+YYHSEK+A+AF + S KNT IRI KNLRVCGDCHTW+KFVSK++GR
Sbjct: 669 QDLDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRILKNLRVCGDCHTWMKFVSKIVGR 728
Query: 1445 EVIARDAKRFHHFKDGLCSCGDYW 1468
++IARD KRFHHF++GLCSCGDYW
Sbjct: 729 DIIARDVKRFHHFRNGLCSCGDYW 752