BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g0290.1
(254 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAK70406.1 pol polyprotein [Citrus x paradisi] 338 e-114
KZV43791.1 hypothetical protein F511_41481 [Dorcoceras hygrometr... 333 e-112
JAT65344.1 Retrovirus-related Pol polyprotein from transposon TN... 330 e-110
>AAK70406.1 pol polyprotein [Citrus x paradisi]
Length = 297
Score = 338 bits (867), Expect = e-114, Method: Compositional matrix adjust.
Identities = 163/250 (65%), Positives = 198/250 (79%), Gaps = 1/250 (0%)
Query: 3 NAKAVSTPLAPHFRLSGKQLSTTTVEKDHMDRIPYASAVGSLMYAMVCTRPDISQAVSVV 62
K V TPLA HF+LS + E+D+M +PYAS VGSL+YAMVCTRPDISQAVS+V
Sbjct: 44 KTKLVCTPLALHFKLSSSSCPRSQEERDYMACVPYASVVGSLIYAMVCTRPDISQAVSMV 103
Query: 63 SRFMANPGKTHWEAVKWVLRYLKGTVDTGLCFGGDTCQ-VSGYVDSDYAGDLDRRRSTTG 121
SR+M NPGK+ W AVKW+LRYL GTVD GL F + Q GY DSD+AGDLD++RST+G
Sbjct: 104 SRYMHNPGKSQWLAVKWILRYLYGTVDVGLLFKKNCGQQCVGYCDSDFAGDLDKQRSTSG 163
Query: 122 YVFRVHGAPVSWRSMLQSTVALSTTEAEYMAMVEGVKEALWLWGLLDGLGIKQECVGVWC 181
YVF + G VSWRS+LQST+ALSTTEAEY+A E VKEA+WL GLL LG+ QE + V+C
Sbjct: 164 YVFTLGGGSVSWRSILQSTIALSTTEAEYIAATEAVKEAIWLKGLLGDLGVIQENIAVFC 223
Query: 182 DSQSAIHLAKNQVHHARTKHIDVRYHFVRDVIEEGDVSLMKVHTDENPADMLTKVVTCSK 241
D+QSAI LAKNQ +HARTKHIDV+YH+VR++IE GDV L K+ T +NP+DMLTKVV+ K
Sbjct: 224 DNQSAIFLAKNQTYHARTKHIDVKYHYVREIIEGGDVLLKKIDTKDNPSDMLTKVVSEVK 283
Query: 242 FQHCLELLQI 251
FQHCL+L+QI
Sbjct: 284 FQHCLKLIQI 293
>KZV43791.1 hypothetical protein F511_41481 [Dorcoceras hygrometricum]
Length = 300
Score = 333 bits (855), Expect = e-112, Method: Compositional matrix adjust.
Identities = 157/255 (61%), Positives = 200/255 (78%), Gaps = 3/255 (1%)
Query: 1 MQNAKAVSTPLAPHFRLSGKQLSTTTVEKDHMDRIPYASAVGSLMYAMVCTRPDISQAVS 60
M +AKAV+TPLA HF+L+ Q+ T EK++M +PYA+ VGS+MYAM+CTRPD++ AVS
Sbjct: 41 MLDAKAVTTPLAAHFKLTVTQVPETEEEKEYMKSVPYANVVGSVMYAMICTRPDLAHAVS 100
Query: 61 VVSRFMANPGKTHWEAVKWVLRYLKGTVDTGLCFGGDTC---QVSGYVDSDYAGDLDRRR 117
VVSRFMANPGK HW+A+KW++RYLKGT + GL +GG+ V GYVDSDYAG +D RR
Sbjct: 101 VVSRFMANPGKCHWQALKWMMRYLKGTQNLGLVYGGNQTGGEAVLGYVDSDYAGSIDTRR 160
Query: 118 STTGYVFRVHGAPVSWRSMLQSTVALSTTEAEYMAMVEGVKEALWLWGLLDGLGIKQECV 177
S TGYVF V+G VSW++ LQS VALSTTEAEY+A+ E VKEALWL GL L ++ + +
Sbjct: 161 SLTGYVFTVYGTAVSWKANLQSVVALSTTEAEYIAVTEAVKEALWLKGLASELKLQDDTL 220
Query: 178 GVWCDSQSAIHLAKNQVHHARTKHIDVRYHFVRDVIEEGDVSLMKVHTDENPADMLTKVV 237
+ CDSQSAIHL KNQV H RTKHIDV+ HFVR+V+ G+V + KV T+EN ADM+TKV+
Sbjct: 221 VLLCDSQSAIHLTKNQVFHERTKHIDVKLHFVREVVAGGEVVIEKVSTEENAADMITKVL 280
Query: 238 TCSKFQHCLELLQID 252
+KF HCL+LL+I+
Sbjct: 281 PSNKFHHCLKLLRIN 295
>JAT65344.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Anthurium amnicola]
Length = 346
Score = 330 bits (845), Expect = e-110, Method: Compositional matrix adjust.
Identities = 158/246 (64%), Positives = 192/246 (78%)
Query: 1 MQNAKAVSTPLAPHFRLSGKQLSTTTVEKDHMDRIPYASAVGSLMYAMVCTRPDISQAVS 60
M +AK VSTPLA HF+LS +T E+ +M R+PY+SAVGSLMYAMVCTRPDISQAVS
Sbjct: 94 MWDAKPVSTPLAVHFKLSASLSPQSTDEEVYMSRVPYSSAVGSLMYAMVCTRPDISQAVS 153
Query: 61 VVSRFMANPGKTHWEAVKWVLRYLKGTVDTGLCFGGDTCQVSGYVDSDYAGDLDRRRSTT 120
VVSR+M+NPGK HW+AVKW+ RYLKGTV+T L FG ++ +SGYVDSD+AGDLDRRRS T
Sbjct: 154 VVSRYMSNPGKVHWQAVKWIFRYLKGTVNTCLEFGRNSDILSGYVDSDFAGDLDRRRSLT 213
Query: 121 GYVFRVHGAPVSWRSMLQSTVALSTTEAEYMAMVEGVKEALWLWGLLDGLGIKQECVGVW 180
GYVF V G VSW++ LQ TVALSTTE E+MA E VKEA+WL GLL L + + ++
Sbjct: 214 GYVFSVGGCAVSWKATLQPTVALSTTETEFMAATEAVKEAMWLRGLLGELSLGHKETIIY 273
Query: 181 CDSQSAIHLAKNQVHHARTKHIDVRYHFVRDVIEEGDVSLMKVHTDENPADMLTKVVTCS 240
CDSQSAIHLAKN V HARTKHI +RYHF+R+++ G +SL K+ EN ADMLTK+VT
Sbjct: 274 CDSQSAIHLAKNPVFHARTKHIQLRYHFIRELLNGGTLSLKKIRGTENIADMLTKIVTTE 333
Query: 241 KFQHCL 246
K + C+
Sbjct: 334 KLRLCI 339