BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g0490.1
(312 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010248762.1 PREDICTED: pentatricopeptide repeat-containing pr... 275 2e-83
XP_012071458.1 PREDICTED: pentatricopeptide repeat-containing pr... 260 9e-78
XP_015878988.1 PREDICTED: pentatricopeptide repeat-containing pr... 256 1e-77
>XP_010248762.1 PREDICTED: pentatricopeptide repeat-containing protein At3g46610
[Nelumbo nucifera]
Length = 763
Score = 275 bits (704), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 135/202 (66%), Positives = 160/202 (79%), Gaps = 11/202 (5%)
Query: 1 MVDGNGALKFFVELKEKYQKEEIRKE-IAEDWESEFVKLEKFVICVCYQVMRCWLVKCDD 59
M DG+GALKFFVEL+EKYQK EI K+ EDWE+EFVKLEKF+I +CYQVMR WLVK D
Sbjct: 327 MEDGDGALKFFVELREKYQKGEIGKDNTDEDWENEFVKLEKFIIRICYQVMRRWLVK-GD 385
Query: 60 HLNTNNVFKLLKEMYSAGLRPDRITHEKLVWVCTLEGHDSVAKELYSRIRERKSEISLSV 119
HLN+ V KLL +M GLRP R HE+LVW CTLEGH +VAKELY+RIRER+S+ISLSV
Sbjct: 386 HLNSR-VLKLLTDMDKVGLRPGRAEHERLVWACTLEGHYTVAKELYNRIRERESDISLSV 444
Query: 120 CNHVIWLLCKAKKWWTALRVYEDLLDKGPKPNNLPNELIISHFNILLTSARKREIWKWG- 178
CNH+IWL+ KAKKWW AL +YEDLLDKGPKPNNL ELI+SHFNILLT+AR+R IW+WG
Sbjct: 445 CNHIIWLMGKAKKWWAALEIYEDLLDKGPKPNNLSYELIVSHFNILLTAARRRGIWRWGV 504
Query: 179 -------DEDFNQSSKAYDAVV 193
D+ S+ ++AV+
Sbjct: 505 RLLNKMEDKGLKPGSREWNAVL 526
>XP_012071458.1 PREDICTED: pentatricopeptide repeat-containing protein At3g46610
[Jatropha curcas] KDP46363.1 hypothetical protein
JCGZ_10203 [Jatropha curcas]
Length = 761
Score = 260 bits (665), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 125/201 (62%), Positives = 154/201 (76%), Gaps = 10/201 (4%)
Query: 1 MVDGNGALKFFVELKEKYQKEEIRKEIAEDWESEFVKLEKFVICVCYQVMRCWLVKCDDH 60
M DGNGAL F+V++KEKY+K EI K+ E+WE EFVKLE F+I +CYQVMR WLV+ D+
Sbjct: 324 MEDGNGALAFYVDIKEKYKKGEIGKDSDENWEKEFVKLENFIIRICYQVMRRWLVRHDNF 383
Query: 61 LNTNNVFKLLKEMYSAGLRPDRITHEKLVWVCTLEGHDSVAKELYSRIRERKSEISLSVC 120
+ NV KLL +M AGL+P R +E+L+W CT E H VAKELYSRIRER SEISLSVC
Sbjct: 384 --SINVLKLLTDMDKAGLKPGRADYERLLWACTREEHYIVAKELYSRIRERYSEISLSVC 441
Query: 121 NHVIWLLCKAKKWWTALRVYEDLLDKGPKPNNLPNELIISHFNILLTSARKREIWKWG-- 178
NHVIWL+ KAKKWW AL +YEDLLDKGP+PNNL +ELI+SHFN+LLT+ARKR IW+WG
Sbjct: 442 NHVIWLMGKAKKWWAALEIYEDLLDKGPRPNNLSHELIVSHFNVLLTAARKRGIWRWGVR 501
Query: 179 ------DEDFNQSSKAYDAVV 193
D+ S+ ++AV+
Sbjct: 502 LLNKMEDKGLKPGSREWNAVL 522
>XP_015878988.1 PREDICTED: pentatricopeptide repeat-containing protein At3g46610
[Ziziphus jujuba]
Length = 585
Score = 256 bits (654), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 123/184 (66%), Positives = 143/184 (77%), Gaps = 2/184 (1%)
Query: 1 MVDGNGALKFFVELKEKYQKEEIRKEIAEDWESEFVKLEKFVICVCYQVMRCWLVKCDDH 60
M DGNGALKFF+E++EKY K EI K+ EDWE+EFVKLE F I VCYQVMR WLVK DD
Sbjct: 183 MEDGNGALKFFIEIREKYDKGEIGKDADEDWENEFVKLENFTIRVCYQVMRSWLVKDDDL 242
Query: 61 LNTNNVFKLLKEMYSAGLRPDRITHEKLVWVCTLEGHDSVAKELYSRIRERKSEISLSVC 120
+ V KLL EM +AG+ + HE+L+W CT E H VAKELY+RIRER SEI LSVC
Sbjct: 243 --SIKVLKLLIEMDNAGVPLGQSEHERLMWACTREEHHIVAKELYNRIRERHSEIRLSVC 300
Query: 121 NHVIWLLCKAKKWWTALRVYEDLLDKGPKPNNLPNELIISHFNILLTSARKREIWKWGDE 180
NHVIWL+ KAKKWWTAL +YEDLLDKGPKPNN+ EL++SHFN LLT+AR+R IWKWG
Sbjct: 301 NHVIWLMGKAKKWWTALEIYEDLLDKGPKPNNMSYELVVSHFNTLLTAARRRGIWKWGVR 360
Query: 181 DFNQ 184
N+
Sbjct: 361 LLNK 364