BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g0590.1
(285 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP71220.1 Retrovirus-related Pol polyprotein from transposon TN... 335 e-107
KYP48513.1 Retrovirus-related Pol polyprotein from transposon TN... 334 e-104
BAH90873.1 Os01g0116166 [Oryza sativa Japonica Group] 321 e-101
>KYP71220.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 690
Score = 335 bits (859), Expect = e-107, Method: Compositional matrix adjust.
Identities = 156/273 (57%), Positives = 197/273 (72%), Gaps = 3/273 (1%)
Query: 1 MRGTRYGNLYKLLGTTVTGDVAVGISGRDPTASTRLWHMRLGHMSEKGLSLMCGKGLLKD 60
++ R G+LY L G+ VTG AV S D A T+LWHMRLGHMSEKG+ L+ +GLL +
Sbjct: 386 LKANRIGSLYILQGSIVTGSAAVSSSMSDKDA-TKLWHMRLGHMSEKGMHLLSKQGLLGN 444
Query: 61 MKKPCMEFCEHCVFEKAHRVTFSTSKHRSKEVLDYVHTDVWGPAKLPSKGGSRYFVTFVD 120
+EFCEHCVF K RV+FST+ HR+K LDY+H+D+WGP+K+PS GG RY +T +D
Sbjct: 445 QGIGKLEFCEHCVFGKQKRVSFSTATHRTKGTLDYIHSDLWGPSKVPSYGGCRYMMTIID 504
Query: 121 DHSRFVWPYFLKHKNEVFNTFLVWKAMVENKTGRKLKTLRSDNGTEYTDGAFKEFCNQEG 180
D SR VW YFL+HKNE F TF WK +VE +TG+K+K LR+DNG E+ +G F EFC G
Sbjct: 505 DFSRKVWVYFLRHKNETFPTFKKWKTLVETQTGKKVKKLRTDNGLEFCEGDFNEFCANHG 564
Query: 181 IVRYWTVVNTPQQNGVVERLNRTLLEKARCMRSNSGL--GVEWWAESVATACYIVNRSPH 238
I R+ T+ PQQNGV ERLNRT+LE+ARCM SN+GL E W E+ +TACY++NRSPH
Sbjct: 565 IARHKTIPGKPQQNGVAERLNRTILERARCMLSNAGLWHQRELWVEAASTACYLINRSPH 624
Query: 239 SSLDGGIPYEVWSGEHAYYGRLRVFGCTAYYHL 271
SSL+ IP E+WSG Y LR+FGC AY H+
Sbjct: 625 SSLNFKIPEEIWSGNPIDYSNLRIFGCPAYAHV 657
>KYP48513.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1032
Score = 334 bits (856), Expect = e-104, Method: Compositional matrix adjust.
Identities = 156/273 (57%), Positives = 197/273 (72%), Gaps = 3/273 (1%)
Query: 1 MRGTRYGNLYKLLGTTVTGDVAVGISGRDPTASTRLWHMRLGHMSEKGLSLMCGKGLLKD 60
++ R G+LY L G+ VTG AV S D A T+LWHMRLGHMSEKG+ L+ +GLL +
Sbjct: 90 LKANRIGSLYILQGSIVTGSAAVSSSMSDKDA-TKLWHMRLGHMSEKGMHLLSKQGLLGN 148
Query: 61 MKKPCMEFCEHCVFEKAHRVTFSTSKHRSKEVLDYVHTDVWGPAKLPSKGGSRYFVTFVD 120
+EFCEHCVF K RV+FST+ HR+K LDY+H+D+WGP+K+PS GG RY +T +D
Sbjct: 149 QGIGKLEFCEHCVFGKQKRVSFSTATHRTKGTLDYIHSDLWGPSKVPSYGGCRYMMTIID 208
Query: 121 DHSRFVWPYFLKHKNEVFNTFLVWKAMVENKTGRKLKTLRSDNGTEYTDGAFKEFCNQEG 180
D SR VW YFL+HKNE F TF WK +VE +TG+K+K LR+DNG E+ +G F EFC G
Sbjct: 209 DFSRKVWVYFLRHKNETFPTFKKWKTLVETQTGKKVKKLRTDNGLEFCEGDFNEFCANHG 268
Query: 181 IVRYWTVVNTPQQNGVVERLNRTLLEKARCMRSNSGL--GVEWWAESVATACYIVNRSPH 238
I R+ T+ PQQNGV ERLNRT+LE+ARCM SN+GL E W E+ +TACY++NRSPH
Sbjct: 269 IARHKTIPGKPQQNGVAERLNRTILERARCMLSNAGLWHQRELWVEAASTACYLINRSPH 328
Query: 239 SSLDGGIPYEVWSGEHAYYGRLRVFGCTAYYHL 271
SSL+ IP E+WSG Y LR+FGC AY H+
Sbjct: 329 SSLNFKIPEEIWSGNPIDYSNLRIFGCPAYAHV 361
>BAH90873.1 Os01g0116166 [Oryza sativa Japonica Group]
Length = 778
Score = 321 bits (823), Expect = e-101, Method: Compositional matrix adjust.
Identities = 146/264 (55%), Positives = 190/264 (71%)
Query: 5 RYGNLYKLLGTTVTGDVAVGISGRDPTASTRLWHMRLGHMSEKGLSLMCGKGLLKDMKKP 64
+ NLY L GTT+ G+VA + +T LWHMRLGHMSE GL+ + +GLL
Sbjct: 370 KSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLYGQSIG 429
Query: 65 CMEFCEHCVFEKAHRVTFSTSKHRSKEVLDYVHTDVWGPAKLPSKGGSRYFVTFVDDHSR 124
++FCEHC+F K RV F+TS H ++ +LDYVH+D+WGPA+ S GG+RY +T VDD+SR
Sbjct: 430 KLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDYSR 489
Query: 125 FVWPYFLKHKNEVFNTFLVWKAMVENKTGRKLKTLRSDNGTEYTDGAFKEFCNQEGIVRY 184
VWPYFLKHK + F+ F WK MVE +T RK+K LR+DNG E+ FK +C EGIVR+
Sbjct: 490 KVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRH 549
Query: 185 WTVVNTPQQNGVVERLNRTLLEKARCMRSNSGLGVEWWAESVATACYIVNRSPHSSLDGG 244
+T+ +TPQQNGV ER+NRT++ KARCM SN+GL ++WAE+V+TACY++NRSP ++D
Sbjct: 550 YTIPHTPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKK 609
Query: 245 IPYEVWSGEHAYYGRLRVFGCTAY 268
P EVWSG Y LRVFGCTAY
Sbjct: 610 TPIEVWSGSPVNYSDLRVFGCTAY 633