BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g0610.1
(223 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAK70406.1 pol polyprotein [Citrus x paradisi] 300 e-100
KZV43791.1 hypothetical protein F511_41481 [Dorcoceras hygrometr... 287 1e-94
JAT65344.1 Retrovirus-related Pol polyprotein from transposon TN... 288 2e-94
>AAK70406.1 pol polyprotein [Citrus x paradisi]
Length = 297
Score = 300 bits (769), Expect = e-100, Method: Compositional matrix adjust.
Identities = 146/220 (66%), Positives = 176/220 (80%), Gaps = 5/220 (2%)
Query: 4 VPYASAVGSLTYVMVCTRPDISQAVSVASRFKANPGKTHWEAVKWVLRYLKGTVDTGLCF 63
VPYAS VGSL Y MVCTRPDISQAVS+ SR+ NPGK+ W AVKW+LRYL GTVD GL F
Sbjct: 76 VPYASVVGSLIYAMVCTRPDISQAVSMVSRYMHNPGKSQWLAVKWILRYLYGTVDVGLLF 135
Query: 64 ---CGDTCQVSGYVDSNYAGYLDRRRSTTGYVFRVHGAPVSWRSMLQSTVALSTTEAEYM 120
CG C GY DS++AG LD++RST+GYVF + G VSWRS+LQST+ALSTTEAEY+
Sbjct: 136 KKNCGQQC--VGYCDSDFAGDLDKQRSTSGYVFTLGGGSVSWRSILQSTIALSTTEAEYI 193
Query: 121 AMAEGVKEALWLWGLLDDLRIKQKCVDVWCDSQSAIHLAKNQVHHARTKHIDVRYHFVRD 180
A E VKEA+WL GLL DL + Q+ + V+CD+QSAI LAKNQ +HARTKHIDV+YH+VR+
Sbjct: 194 AATEAVKEAIWLKGLLGDLGVIQENIAVFCDNQSAIFLAKNQTYHARTKHIDVKYHYVRE 253
Query: 181 VIEEGDVSPMKVHTDENPADMLTKVVTCSKFQHCLELLQI 220
+IE GDV K+ T +NP+DMLTKVV+ KFQHCL+L+QI
Sbjct: 254 IIEGGDVLLKKIDTKDNPSDMLTKVVSEVKFQHCLKLIQI 293
>KZV43791.1 hypothetical protein F511_41481 [Dorcoceras hygrometricum]
Length = 300
Score = 287 bits (735), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 136/226 (60%), Positives = 171/226 (75%), Gaps = 3/226 (1%)
Query: 1 MDRVPYASAVGSLTYVMVCTRPDISQAVSVASRFKANPGKTHWEAVKWVLRYLKGTVDTG 60
M VPYA+ VGS+ Y M+CTRPD++ AVSV SRF ANPGK HW+A+KW++RYLKGT + G
Sbjct: 72 MKSVPYANVVGSVMYAMICTRPDLAHAVSVVSRFMANPGKCHWQALKWMMRYLKGTQNLG 131
Query: 61 LCFCGDTC---QVSGYVDSNYAGYLDRRRSTTGYVFRVHGAPVSWRSMLQSTVALSTTEA 117
L + G+ V GYVDS+YAG +D RRS TGYVF V+G VSW++ LQS VALSTTEA
Sbjct: 132 LVYGGNQTGGEAVLGYVDSDYAGSIDTRRSLTGYVFTVYGTAVSWKANLQSVVALSTTEA 191
Query: 118 EYMAMAEGVKEALWLWGLLDDLRIKQKCVDVWCDSQSAIHLAKNQVHHARTKHIDVRYHF 177
EY+A+ E VKEALWL GL +L+++ + + CDSQSAIHL KNQV H RTKHIDV+ HF
Sbjct: 192 EYIAVTEAVKEALWLKGLASELKLQDDTLVLLCDSQSAIHLTKNQVFHERTKHIDVKLHF 251
Query: 178 VRDVIEEGDVSPMKVHTDENPADMLTKVVTCSKFQHCLELLQIGSC 223
VR+V+ G+V KV T+EN ADM+TKV+ +KF HCL+LL+I
Sbjct: 252 VREVVAGGEVVIEKVSTEENAADMITKVLPSNKFHHCLKLLRINEV 297
>JAT65344.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Anthurium amnicola]
Length = 346
Score = 288 bits (737), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 137/215 (63%), Positives = 166/215 (77%)
Query: 1 MDRVPYASAVGSLTYVMVCTRPDISQAVSVASRFKANPGKTHWEAVKWVLRYLKGTVDTG 60
M RVPY+SAVGSL Y MVCTRPDISQAVSV SR+ +NPGK HW+AVKW+ RYLKGTV+T
Sbjct: 125 MSRVPYSSAVGSLMYAMVCTRPDISQAVSVVSRYMSNPGKVHWQAVKWIFRYLKGTVNTC 184
Query: 61 LCFCGDTCQVSGYVDSNYAGYLDRRRSTTGYVFRVHGAPVSWRSMLQSTVALSTTEAEYM 120
L F ++ +SGYVDS++AG LDRRRS TGYVF V G VSW++ LQ TVALSTTE E+M
Sbjct: 185 LEFGRNSDILSGYVDSDFAGDLDRRRSLTGYVFSVGGCAVSWKATLQPTVALSTTETEFM 244
Query: 121 AMAEGVKEALWLWGLLDDLRIKQKCVDVWCDSQSAIHLAKNQVHHARTKHIDVRYHFVRD 180
A E VKEA+WL GLL +L + K ++CDSQSAIHLAKN V HARTKHI +RYHF+R+
Sbjct: 245 AATEAVKEAMWLRGLLGELSLGHKETIIYCDSQSAIHLAKNPVFHARTKHIQLRYHFIRE 304
Query: 181 VIEEGDVSPMKVHTDENPADMLTKVVTCSKFQHCL 215
++ G +S K+ EN ADMLTK+VT K + C+
Sbjct: 305 LLNGGTLSLKKIRGTENIADMLTKIVTTEKLRLCI 339