BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g0800.1
(266 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP47640.1 Retrovirus-related Pol polyprotein from transposon TN... 373 e-119
KYP53356.1 Retrovirus-related Pol polyprotein from transposon TN... 355 e-118
ABA99474.1 retrotransposon protein, putative, Ty1-copia subclass... 369 e-118
>KYP47640.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1032
Score = 373 bits (958), Expect = e-119, Method: Compositional matrix adjust.
Identities = 181/266 (68%), Positives = 216/266 (81%), Gaps = 1/266 (0%)
Query: 1 MQEEMESLHKNKTWEVVPLPEGKSVIGCKWVYKKKEDSSEINGTRYKARLVVKGYAQKEG 60
M EEMESL +N+TW++ LP+GK IGCKWVY KK+ S+ + RYKARLV KGYAQKEG
Sbjct: 598 MSEEMESLRRNQTWKLANLPKGKKAIGCKWVYAKKDGFSDKSEVRYKARLVAKGYAQKEG 657
Query: 61 IDYNEIFSPVVKQNSIRVLLSIVAHSDLELEQLDVKIAFLHGDLEEEIYMAQPEGYKVEG 120
IDYNE+FSPVVK +SIRVLL++VA D+EL Q+DVK AFLHGDLEEEIYM QPEG+KV G
Sbjct: 658 IDYNEVFSPVVKHSSIRVLLALVAQLDMELVQMDVKTAFLHGDLEEEIYMTQPEGFKVAG 717
Query: 121 KENQVCRLRKSLYGLKQSPRQWYKRFDFFMLKHGFRRSDYDCCVYIKKLREGDFIYLLLY 180
KEN C+L KSLYGLKQSPRQWYKRFD FML+ + RS YD CVY++KL +G FIYLLLY
Sbjct: 718 KENMFCKLEKSLYGLKQSPRQWYKRFDKFMLRQKYTRSKYDHCVYLRKLHDGSFIYLLLY 777
Query: 181 VDDMLIASRSMVEIDKLKSQLSQEFEMKDMGAAKKILGMEIKRERSSKKLYLNQKGYIER 240
VDDMLIAS++ EI+KLK+QL+ EFEMKD+G AKKILGMEI R+R +L L QK Y++R
Sbjct: 778 VDDMLIASKNKEEIEKLKTQLNGEFEMKDLGEAKKILGMEISRDRKLGRLCLTQKEYLKR 837
Query: 241 VVSRFGIQN-AKAVLTPLTPHFRLSG 265
V+ RFGI + +K V TPL HF+LS
Sbjct: 838 VLKRFGISDESKPVSTPLASHFKLSA 863
>KYP53356.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 503
Score = 355 bits (912), Expect = e-118, Method: Compositional matrix adjust.
Identities = 170/265 (64%), Positives = 207/265 (78%)
Query: 1 MQEEMESLHKNKTWEVVPLPEGKSVIGCKWVYKKKEDSSEINGTRYKARLVVKGYAQKEG 60
M EE+ESLHKN TW + LP+GK + CKW+YKKK+ + R KARLVVKG+ QKEG
Sbjct: 1 MNEEIESLHKNNTWNLTKLPKGKRPLRCKWIYKKKDGIPGVEDPRCKARLVVKGFYQKEG 60
Query: 61 IDYNEIFSPVVKQNSIRVLLSIVAHSDLELEQLDVKIAFLHGDLEEEIYMAQPEGYKVEG 120
ID+NEIFSPVV+ SIR+LL+ VA DLELEQLDVK AFLHG+LEEEIYM QPEG+ V
Sbjct: 61 IDFNEIFSPVVRHTSIRILLAFVALFDLELEQLDVKTAFLHGELEEEIYMDQPEGFVVPS 120
Query: 121 KENQVCRLRKSLYGLKQSPRQWYKRFDFFMLKHGFRRSDYDCCVYIKKLREGDFIYLLLY 180
KE+ VC+L+KSLYGLKQ+PRQWYK+FD FM+ G+ RS YD C+Y ++ +G FIYLLLY
Sbjct: 121 KEHLVCQLKKSLYGLKQAPRQWYKKFDSFMIGQGYSRSKYDDCIYFQQFPDGTFIYLLLY 180
Query: 181 VDDMLIASRSMVEIDKLKSQLSQEFEMKDMGAAKKILGMEIKRERSSKKLYLNQKGYIER 240
VDDMLIASR I KLK+QL+ EFEMK++GAAKKILGMEI R+R KL+L+Q+ YIER
Sbjct: 181 VDDMLIASRDKSLISKLKAQLNNEFEMKELGAAKKILGMEIHRDRQVGKLFLSQQKYIER 240
Query: 241 VVSRFGIQNAKAVLTPLTPHFRLSG 265
++ RF + N K V TPL HF+LS
Sbjct: 241 LLDRFNMNNCKPVSTPLAAHFKLSS 265
>ABA99474.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 983
Score = 369 bits (947), Expect = e-118, Method: Compositional matrix adjust.
Identities = 180/265 (67%), Positives = 212/265 (80%), Gaps = 1/265 (0%)
Query: 1 MQEEMESLHKNKTWEVVPLPEGKSVIGCKWVYKKKEDSSEINGTRYKARLVVKGYAQKEG 60
M +EMESL KN TWE+V LP+ K I CKW++K+KE S + RYKARLV KGY+Q
Sbjct: 577 MHDEMESLEKNHTWELVKLPKEKKSIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPS 636
Query: 61 IDYNEIFSPVVKQNSIRVLLSIVAHSDLELEQLDVKIAFLHGDLEEEIYMAQPEGYKVEG 120
ID+N++FSP+VK +SIR LLSIVA D ELEQ+DVK AFLHG+LEE+IYM QPEG+ V G
Sbjct: 637 IDFNDVFSPIVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPG 696
Query: 121 KENQVCRLRKSLYGLKQSPRQWYKRFDFFMLKHGFRRSDYDCCVYIKKLREGDFIYLLLY 180
KEN VCRL+KSLYGLKQSPRQWYKRFD FML FRRS+YD CVY+K + +G IYLLLY
Sbjct: 697 KENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDNCVYLKVV-DGSAIYLLLY 755
Query: 181 VDDMLIASRSMVEIDKLKSQLSQEFEMKDMGAAKKILGMEIKRERSSKKLYLNQKGYIER 240
VDDMLIA++ EI+KLK+QLS EFEMKD+GAAKKILGMEI RER S KLYL+QKGYIE+
Sbjct: 756 VDDMLIAAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKGYIEK 815
Query: 241 VVSRFGIQNAKAVLTPLTPHFRLSG 265
V+ RF + +AK V TPL HFR S
Sbjct: 816 VLRRFNMHDAKPVSTPLAAHFRSSS 840