BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g0860.1
(160 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_013627779.1 PREDICTED: uncharacterized protein LOC106333945 [... 91 5e-20
XP_013682086.1 PREDICTED: uncharacterized protein LOC106386817 [... 90 1e-19
XP_009132462.1 PREDICTED: uncharacterized protein LOC103857068 [... 89 3e-19
>XP_013627779.1 PREDICTED: uncharacterized protein LOC106333945 [Brassica oleracea
var. oleracea] CDY53479.1 BnaC03g14830D [Brassica napus]
Length = 204
Score = 91.3 bits (225), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 78/124 (62%), Gaps = 14/124 (11%)
Query: 1 MMNKVGQIFVLVLMVVSS-AAPGLADTQPKVQGETLLWPWIPHLPIDQDIQRCWSTIKSI 59
M K+ IF +VL++ + PGLA+ Q T +P IP PID I +CWS++ SI
Sbjct: 1 MEGKIEIIFSMVLVIATILMRPGLAEVQ-----TTPRFPSIPGSPID--ITKCWSSLTSI 53
Query: 60 EGCELEILNSLLGGRI-HLGPACCKAISDISENCIPKMFSGFLPPFSPLFPPLLKNYCAT 118
+GC +EI S++ G+ ++GPACCKA +D+ C P MF P +PLFPPL+K+ C+
Sbjct: 54 QGCVMEIYKSVVTGKFENVGPACCKAFTDVDAKCWPTMF-----PLNPLFPPLIKDGCSR 108
Query: 119 VSGS 122
+SG+
Sbjct: 109 ISGA 112
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 53/88 (60%), Gaps = 8/88 (9%)
Query: 34 TLLWPWIPHLPIDQDIQRCWSTIKSIEGCELEILNSLLGGRI-HLGPACCKAISDISENC 92
TL +P P P+D + +C S++ S++GC EI SLL G+ ++G CCKA I C
Sbjct: 118 TLKFPVFPGSPVD--LTKCLSSLVSVQGCVTEIHKSLLTGKFDNVGAMCCKAFLAIDAKC 175
Query: 93 IPKMFSGFLPPFSPLFPPLLKNYCATVS 120
P+MF P +P FPPLLK+ C+ ++
Sbjct: 176 WPQMF-----PLNPFFPPLLKDGCSRIA 198
>XP_013682086.1 PREDICTED: uncharacterized protein LOC106386817 [Brassica napus]
Length = 204
Score = 90.1 bits (222), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 77/124 (62%), Gaps = 14/124 (11%)
Query: 1 MMNKVGQIFVLVLMVVSS-AAPGLADTQPKVQGETLLWPWIPHLPIDQDIQRCWSTIKSI 59
M K+ IF +VL++ + PGLA+ Q T +P IP PID I +CWS++ SI
Sbjct: 1 MEGKIEIIFSMVLVIATILMRPGLAEVQ-----TTPRFPSIPGSPID--ITKCWSSLTSI 53
Query: 60 EGCELEILNSLLGGRI-HLGPACCKAISDISENCIPKMFSGFLPPFSPLFPPLLKNYCAT 118
+GC EI S++ G+ ++GPACCKA +D+ C P MF P +PLFPPL+K+ C+
Sbjct: 54 QGCVTEIYKSVVTGKFENVGPACCKAFTDVDAKCWPTMF-----PLNPLFPPLIKDGCSR 108
Query: 119 VSGS 122
+SG+
Sbjct: 109 ISGA 112
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 53/88 (60%), Gaps = 8/88 (9%)
Query: 34 TLLWPWIPHLPIDQDIQRCWSTIKSIEGCELEILNSLLGGRI-HLGPACCKAISDISENC 92
TL +P P P+D + +C S++ S++GC EI SLL G+ ++G CCKA I C
Sbjct: 118 TLKFPVFPGSPVD--LTKCLSSLVSVQGCVTEIHKSLLTGKFDNVGAMCCKAFLAIDAKC 175
Query: 93 IPKMFSGFLPPFSPLFPPLLKNYCATVS 120
P+MF P +P FPPLLK+ C+ ++
Sbjct: 176 WPQMF-----PLNPFFPPLLKDGCSRIA 198
>XP_009132462.1 PREDICTED: uncharacterized protein LOC103857068 [Brassica rapa]
XP_013733883.1 PREDICTED: uncharacterized protein
LOC106437528 [Brassica napus]
Length = 204
Score = 89.4 bits (220), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 77/124 (62%), Gaps = 14/124 (11%)
Query: 1 MMNKVGQIFVLVLMVVSS-AAPGLADTQPKVQGETLLWPWIPHLPIDQDIQRCWSTIKSI 59
M K+ IF +VL++ + PG+A+ Q Q +P IP PID I +CWS++ SI
Sbjct: 1 MEGKIEIIFSMVLVIATILMRPGIAEIQTVPQ-----FPLIPGSPID--ITKCWSSLTSI 53
Query: 60 EGCELEILNSLLGGRI-HLGPACCKAISDISENCIPKMFSGFLPPFSPLFPPLLKNYCAT 118
+GC EI S++ G+ ++GPACCKA +D+ C P MF P +PLFPPL+K+ C+
Sbjct: 54 QGCVTEIYKSVVTGKFENVGPACCKAFTDVDAKCWPTMF-----PLNPLFPPLIKDGCSR 108
Query: 119 VSGS 122
+SG+
Sbjct: 109 ISGA 112
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 8/88 (9%)
Query: 34 TLLWPWIPHLPIDQDIQRCWSTIKSIEGCELEILNSLLGGRI-HLGPACCKAISDISENC 92
TL +P IP P+D + +C S++ S++GC EI SLL G+ ++G CCKA I C
Sbjct: 118 TLQFPVIPGSPVD--LTKCLSSLVSVQGCVTEIHKSLLTGKFDNVGAMCCKAFLVIDAKC 175
Query: 93 IPKMFSGFLPPFSPLFPPLLKNYCATVS 120
P+MF P +P FPPLLK+ C+ ++
Sbjct: 176 WPQMF-----PLNPFFPPLLKDGCSRIA 198