BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g0960.1
(150 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP34377.1 Retrovirus-related Pol polyprotein from transposon TN... 265 6e-81
KYP38661.1 Retrovirus-related Pol polyprotein from transposon TN... 261 3e-80
GAU16220.1 hypothetical protein TSUD_298520 [Trifolium subterran... 245 3e-74
>KYP34377.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 938
Score = 265 bits (677), Expect = 6e-81, Method: Composition-based stats.
Identities = 120/150 (80%), Positives = 134/150 (89%)
Query: 1 MKSSHWKEAMAKEISALEENKTWTITSLLPGKRPIGCKWVYKIKFKSDGSIERYKARLVA 60
MKS+ W+EAMAKEI ALE N TW++ L GK IGCKWVYKIK++SDGSIERYKA LVA
Sbjct: 630 MKSAEWREAMAKEIQALESNNTWSLCPLPQGKSSIGCKWVYKIKYRSDGSIERYKACLVA 689
Query: 61 KGYTQIEGLDYTDTFAPVAKLVTVRVLLSLAAIKGWSLHQLDVNNAFLQGDLNEKVYMKL 120
KGYTQIEG+DY DTFAPVAKLVTVR+LLS+AAIK WSLHQLDVNNAFLQGDLNE+VYMKL
Sbjct: 690 KGYTQIEGIDYHDTFAPVAKLVTVRLLLSIAAIKNWSLHQLDVNNAFLQGDLNEEVYMKL 749
Query: 121 PPGFSSQGESKVCRLHKFLYGLKQASRQWF 150
PPGFS +GE+ VC+LHK +YGLKQASRQWF
Sbjct: 750 PPGFSRKGETYVCKLHKSIYGLKQASRQWF 779
>KYP38661.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 778
Score = 261 bits (666), Expect = 3e-80, Method: Composition-based stats.
Identities = 118/150 (78%), Positives = 132/150 (88%)
Query: 1 MKSSHWKEAMAKEISALEENKTWTITSLLPGKRPIGCKWVYKIKFKSDGSIERYKARLVA 60
MKS+ W+EAMAKEI ALE N TW++ L GK IGCKWVYKIK++SDGSIERYKARLVA
Sbjct: 344 MKSAEWREAMAKEIQALESNNTWSLCPLPQGKSSIGCKWVYKIKYRSDGSIERYKARLVA 403
Query: 61 KGYTQIEGLDYTDTFAPVAKLVTVRVLLSLAAIKGWSLHQLDVNNAFLQGDLNEKVYMKL 120
KGY QIEG+DY DTFAPVAKLV VR+LLS+AAIK WSLHQLDVNN FLQGDLNE+VYMKL
Sbjct: 404 KGYAQIEGIDYHDTFAPVAKLVIVRLLLSIAAIKNWSLHQLDVNNDFLQGDLNEEVYMKL 463
Query: 121 PPGFSSQGESKVCRLHKFLYGLKQASRQWF 150
PP FS +GE+ VC+LHKF+YGLKQASRQWF
Sbjct: 464 PPRFSRKGETYVCKLHKFIYGLKQASRQWF 493
>GAU16220.1 hypothetical protein TSUD_298520 [Trifolium subterraneum]
Length = 801
Score = 245 bits (626), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 113/150 (75%), Positives = 130/150 (86%)
Query: 1 MKSSHWKEAMAKEISALEENKTWTITSLLPGKRPIGCKWVYKIKFKSDGSIERYKARLVA 60
++S+ W+EAMAKEI ALE N TW + L GK IGCKWVYKIK+ SDG+IERYKARLVA
Sbjct: 396 IQSTEWREAMAKEIQALESNNTWVLCPLPEGKSAIGCKWVYKIKYHSDGTIERYKARLVA 455
Query: 61 KGYTQIEGLDYTDTFAPVAKLVTVRVLLSLAAIKGWSLHQLDVNNAFLQGDLNEKVYMKL 120
KGYTQ++G+DY DTFAPVAKLVTVR LLS+AAIK WSLHQLDVNNAFLQGDL E+VYMKL
Sbjct: 456 KGYTQVQGIDYHDTFAPVAKLVTVRRLLSIAAIKNWSLHQLDVNNAFLQGDLGEEVYMKL 515
Query: 121 PPGFSSQGESKVCRLHKFLYGLKQASRQWF 150
PPGFS +G+ VC+L+K +YGLKQASRQWF
Sbjct: 516 PPGFSHKGKPCVCKLNKSIYGLKQASRQWF 545