BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1050.1
(159 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_013627779.1 PREDICTED: uncharacterized protein LOC106333945 [... 84 2e-17
XP_006282203.1 hypothetical protein CARUB_v10028469mg [Capsella ... 82 3e-17
XP_013691112.1 PREDICTED: uncharacterized protein LOC106395135 [... 83 1e-16
>XP_013627779.1 PREDICTED: uncharacterized protein LOC106333945 [Brassica oleracea
var. oleracea] CDY53479.1 BnaC03g14830D [Brassica napus]
Length = 204
Score = 84.3 bits (207), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 74/123 (60%), Gaps = 14/123 (11%)
Query: 2 MMNKVGQFFVLVLIVVSS-ATPGLADTQRKVQGETFLWPGTPDLPIDQDIQRCWSTIKSI 60
M K+ F +VL++ + PGLA+ Q T +P P PID I +CWS++ SI
Sbjct: 1 MEGKIEIIFSMVLVIATILMRPGLAEVQ-----TTPRFPSIPGSPID--ITKCWSSLTSI 53
Query: 61 EGCELEILNSLL-GGLIHLGPACCKAISDISENCVPKMFSGFLPPLSPIFPPFLKNYCAT 119
+GC +EI S++ G ++GPACCKA +D+ C P MF PL+P+FPP +K+ C+
Sbjct: 54 QGCVMEIYKSVVTGKFENVGPACCKAFTDVDAKCWPTMF-----PLNPLFPPLIKDGCSR 108
Query: 120 LNG 122
++G
Sbjct: 109 ISG 111
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 11/85 (12%)
Query: 37 LWPGTPDLPIDQDIQRCWSTIKSIEGCELEILNSLL-GGLIHLGPACCKAISDISENCVP 95
++PG+P D+ +C S++ S++GC EI SLL G ++G CCKA I C P
Sbjct: 123 VFPGSP-----VDLTKCLSSLVSVQGCVTEIHKSLLTGKFDNVGAMCCKAFLAIDAKCWP 177
Query: 96 KMFSGFLPPLSPIFPPFLKNYCATL 120
+MF PL+P FPP LK+ C+ +
Sbjct: 178 QMF-----PLNPFFPPLLKDGCSRI 197
>XP_006282203.1 hypothetical protein CARUB_v10028469mg [Capsella rubella]
EOA15101.1 hypothetical protein CARUB_v10028469mg
[Capsella rubella]
Length = 120
Score = 81.6 bits (200), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 64/116 (55%), Gaps = 11/116 (9%)
Query: 6 VGQFFVLVLIVVSSATPGLADTQRKVQGETFLWPGTPDLPIDQDIQRCWSTIKSIEGCEL 65
V F +L L + AT G+A TQ F PG+P D+ +CWS++ S+EGC L
Sbjct: 7 VSIFLILSLCAATFATQGVAHTQTPPTVPGFFLPGSPI-----DLVKCWSSLFSVEGCVL 61
Query: 66 EILNSLLGGLI-HLGPACCKAISDISENCVPKMFSGFLPPLSPIFPPFLKNYCATL 120
EI S+ G ++ ACCKA S + NC P MF PL+P FPP LK+ CA +
Sbjct: 62 EISKSIFSGKFENVQAACCKAFSTLDANCWPHMF-----PLNPFFPPLLKDTCAHI 112
>XP_013691112.1 PREDICTED: uncharacterized protein LOC106395135 [Brassica napus]
Length = 214
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 75/148 (50%), Gaps = 16/148 (10%)
Query: 2 MMNKVGQFFVLVLIVVSSAT----PGLADTQRKVQGETFLWPGTPDLPIDQDIQRCWSTI 57
M ++ ++LIV AT PGLA+ Q Q +F PG+P D+ +CWS++
Sbjct: 1 MEGRIQALVSMILIVTLCATILLQPGLAEVQVTPQFTSF--PGSP-----IDLTKCWSSL 53
Query: 58 KSIEGCELEILNSLLGGLIHLGPACCKAISDISENCVPKMFSGFLPPLSPIFPPFLKNYC 117
S E C ++I + G + ACCKA D+ + C PKMF P +P F P LKN C
Sbjct: 54 FSAEDCVIDIYKFSVTGKFGINQACCKAFMDMDDKCWPKMF-----PFNPFFRPLLKNSC 108
Query: 118 ATLNGRGGVSSPPPPPPTDQGVVAPPTP 145
+ +NG + P PT GV P +P
Sbjct: 109 SRINGVVLTHTTPHQVPTIPGVSHPGSP 136
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 6/73 (8%)
Query: 49 DIQRCWSTIKSIEGCELEILNSLL-GGLIHLGPACCKAISDISENCVPKMFSGFLPPLSP 107
D+ +CWS++ S++GC EI S+ G ++GP CCKA S + C P MF PL+
Sbjct: 138 DLTKCWSSLTSVQGCVTEIYKSVFTGKFDNVGPMCCKAASAVDAKCWPHMF-----PLNT 192
Query: 108 IFPPFLKNYCATL 120
FP LK C+ +
Sbjct: 193 FFPHLLKESCSRI 205