BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1230.1
(297 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_008644270.1 PREDICTED: 60S ribosomal protein L10 isoform X1 [... 104 3e-23
XP_003568844.1 PREDICTED: 60S ribosomal protein L10-2 isoform X1... 103 4e-23
AFW68266.1 QM1-like protein [Zea mays] 102 4e-23
>XP_008644270.1 PREDICTED: 60S ribosomal protein L10 isoform X1 [Zea mays]
Length = 232
Score = 104 bits (259), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 51/63 (80%)
Query: 68 CIRPARCYRQIKNKPYPKPWYCRGVPDPKIRIYDVGMKRKGVDEFSCPVHLIRSLKEKVK 127
C+ PARCYRQIKNKPYPK YCRGVPDPKIRIYDVGMKRKGVDEF VHL+ KE V
Sbjct: 14 CLGPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENVS 73
Query: 128 KES 130
E+
Sbjct: 74 SEA 76
>XP_003568844.1 PREDICTED: 60S ribosomal protein L10-2 isoform X1 [Brachypodium
distachyon] KQK07306.1 hypothetical protein
BRADI_2g34440 [Brachypodium distachyon]
Length = 219
Score = 103 bits (257), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/61 (78%), Positives = 51/61 (83%)
Query: 70 RPARCYRQIKNKPYPKPWYCRGVPDPKIRIYDVGMKRKGVDEFSCPVHLIRSLKEKVKKE 129
RPARCYRQIKNKPYPK YCRGVPDPKIRIYDVGMK+KGVDEFS VHL+ KE V E
Sbjct: 4 RPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFSHCVHLVSWEKENVSSE 63
Query: 130 S 130
+
Sbjct: 64 A 64
>AFW68266.1 QM1-like protein [Zea mays]
Length = 171
Score = 102 bits (254), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/61 (78%), Positives = 50/61 (81%)
Query: 70 RPARCYRQIKNKPYPKPWYCRGVPDPKIRIYDVGMKRKGVDEFSCPVHLIRSLKEKVKKE 129
RPARCYRQIKNKPYPK YCRGVPDPKIRIYDVGMKRKGVDEF VHL+ KE V E
Sbjct: 4 RPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENVSSE 63
Query: 130 S 130
+
Sbjct: 64 A 64