BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1340.1
(219 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAN61270.1 hypothetical protein VITISV_020532 [Vitis vinifera] 268 4e-86
CAN75533.1 hypothetical protein VITISV_024796 [Vitis vinifera] 268 2e-81
KYP34568.1 Retrovirus-related Pol polyprotein from transposon TN... 256 2e-81
>CAN61270.1 hypothetical protein VITISV_020532 [Vitis vinifera]
Length = 369
Score = 268 bits (684), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 134/220 (60%), Positives = 161/220 (73%), Gaps = 12/220 (5%)
Query: 4 NKANSNFAKVLGQSDKITYKCTHCNKIGHTKSHCYELLGYPEWWDHNR---KKNSKKT-- 58
+++ +N K+ DK T+KCTHCNK GHTKS C+E++GYP+WWDHN KK+SKKT
Sbjct: 130 DQSKTNHPKINPNIDKSTFKCTHCNKTGHTKSCCFEIMGYPDWWDHNHDQWKKDSKKTST 189
Query: 59 -------LVDPTVKQTSSTIATTGNVSKTLNMSTQFSNSTWIIDSGATDHMTFDSRQVST 111
+ ++ S+ +A T K LN ST NS WIIDSGATDHMTFDSRQVS
Sbjct: 190 AAVAEIKIETNVTEKASALVAATDYGGKFLNTSTPVINSAWIIDSGATDHMTFDSRQVSP 249
Query: 112 INESSHKYVSTANGTSAPVVGEGPITLTNTLNLDSVLVVPSLDHNLLSVSQITTTLFCVV 171
SS K VS ANG + PV+ +G +TLT+TLNLDS+LVVPSLD+NLLSVSQITTTL C+V
Sbjct: 250 FRPSSQKIVSIANGNTTPVIRKGSLTLTDTLNLDSILVVPSLDYNLLSVSQITTTLSCIV 309
Query: 172 IFWPEFCVFKDIRTRQTIGYGVRRGKLYYLDLVSESSNKL 211
IFWPEFCVFKDI+ RQ IG G++RGKLYYLDL S SNKL
Sbjct: 310 IFWPEFCVFKDIQIRQMIGCGIKRGKLYYLDLQSNDSNKL 349
>CAN75533.1 hypothetical protein VITISV_024796 [Vitis vinifera]
Length = 861
Score = 268 bits (686), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 134/220 (60%), Positives = 163/220 (74%), Gaps = 12/220 (5%)
Query: 4 NKANSNFAKVLGQSDKITYKCTHCNKIGHTKSHCYELLGYPEWWDHNR---KKNSKKT-- 58
+++ +N K DK +KCTHCNK HTKS C+E++GYP+WWDHNR KK+SKKT
Sbjct: 215 DQSKTNHPKTNPNIDKSIFKCTHCNKTSHTKSRCFEIVGYPDWWDHNRDQRKKDSKKTST 274
Query: 59 ------LVDPTVKQTSST-IATTGNVSKTLNMSTQFSNSTWIIDSGATDHMTFDSRQVST 111
+ V + +ST IA T K LN ST N+ WIID GATDHMTFDSRQVS
Sbjct: 275 AAIAEIKTEANVDEKASTLIAATNYGGKFLNTSTPVINNAWIIDFGATDHMTFDSRQVSP 334
Query: 112 INESSHKYVSTANGTSAPVVGEGPITLTNTLNLDSVLVVPSLDHNLLSVSQITTTLFCVV 171
+ SS K+VSTANG + PV+GEG +TLTNTLNLDS+LV SL++NLLSVSQIT L C+V
Sbjct: 335 VRPSSQKFVSTANGNTTPVIGEGSLTLTNTLNLDSILVASSLNYNLLSVSQITAALSCIV 394
Query: 172 IFWPEFCVFKDIRTRQTIGYGVRRGKLYYLDLVSESSNKL 211
IFWP FCVFKDI+TRQTIG+G++RGKLYYLDL+S+ SNKL
Sbjct: 395 IFWPXFCVFKDIQTRQTIGFGIKRGKLYYLDLLSKDSNKL 434
>KYP34568.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 373
Score = 256 bits (653), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 127/215 (59%), Positives = 156/215 (72%), Gaps = 23/215 (10%)
Query: 5 KANSNFAKVLGQSDKITYKCTHCNKIGHTKSHCYELLGYPEWWDHNRKKNSK-------- 56
KANSNF KCTHCN+ GHTKS C+EL GYPEWWDH+R + K
Sbjct: 92 KANSNF------------KCTHCNQQGHTKSRCFELNGYPEWWDHSRDQRRKNPTTAVVE 139
Query: 57 KTLVDPTVKQTSSTIATTGNVSKTLNMSTQFSNSTWIIDSGATDHMTFDSRQVSTINESS 116
++D K++S+ +AT GN + S +NSTWIIDS ATDHMTFDSRQ+S++ SS
Sbjct: 140 AKIIDDASKESSALMATRGNNGE---FSIPITNSTWIIDSDATDHMTFDSRQISSMKPSS 196
Query: 117 HKYVSTANGTSAPVVGEGPITLTNTLNLDSVLVVPSLDHNLLSVSQITTTLFCVVIFWPE 176
+ +STANG + V+G+G +TLTN L LDS+LVVPSL++NLLSVSQITT L CVVIFWP
Sbjct: 197 KELISTANGNTTSVIGKGSLTLTNNLTLDSILVVPSLEYNLLSVSQITTALNCVVIFWPN 256
Query: 177 FCVFKDIRTRQTIGYGVRRGKLYYLDLVSESSNKL 211
FCVFKDI+T+QTIGYGV+RG+LYYLDL S+ S KL
Sbjct: 257 FCVFKDIQTKQTIGYGVKRGRLYYLDLGSKDSRKL 291