BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1420.1
(196 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAN80895.1 hypothetical protein VITISV_031817 [Vitis vinifera] 293 4e-97
ERM98543.1 hypothetical protein AMTR_s04311p00004950, partial [A... 283 1e-93
KYP43701.1 Retrovirus-related Pol polyprotein from transposon TN... 273 4e-90
>CAN80895.1 hypothetical protein VITISV_031817 [Vitis vinifera]
Length = 324
Score = 293 bits (750), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 137/192 (71%), Positives = 158/192 (82%), Gaps = 2/192 (1%)
Query: 2 GIKHILRYLRGTTDMGLFYSKNSSDGSQVTGYTDAGYLSDPHKGVSQTGYVFTSGGTAFS 61
GIKHILRYLRGTTDMGLFYS+ S Q+ GY DAGYLSDPHKG SQTGYVF GTA S
Sbjct: 50 GIKHILRYLRGTTDMGLFYSRESKQ--QLLGYADAGYLSDPHKGRSQTGYVFNCNGTAIS 107
Query: 62 WRSSKQSMPATSSNHSEIIALHEATRECVWLRSIISHIRLSCDLPGITKSPTVIYEDNAA 121
WRS KQ+M ATSSNHSEI+A+HEA+REC+WLRS+I HIR SC L I PT ++EDNAA
Sbjct: 108 WRSVKQTMVATSSNHSEILAIHEASRECIWLRSMIQHIRESCGLSSIKGGPTTLFEDNAA 167
Query: 122 CIAQIREGYIKGDRTKHISPKLFFSHHLQKNGEIDIQKIQSCENYADFFTKSLPTTTFRK 181
CIAQI GYIKGDRTKHISPK F++H LQK+GEID+Q+I+S +N AD FTKSLPT+TF+K
Sbjct: 168 CIAQITGGYIKGDRTKHISPKFFYTHELQKSGEIDVQQIRSSDNLADLFTKSLPTSTFKK 227
Query: 182 LVEGIGMRSLNN 193
L+ IGMR L +
Sbjct: 228 LIHRIGMRQLKD 239
>ERM98543.1 hypothetical protein AMTR_s04311p00004950, partial [Amborella
trichopoda]
Length = 288
Score = 283 bits (724), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 131/192 (68%), Positives = 159/192 (82%), Gaps = 2/192 (1%)
Query: 2 GIKHILRYLRGTTDMGLFYSKNSSDGSQVTGYTDAGYLSDPHKGVSQTGYVFTSGGTAFS 61
GIKHILRYL+GT D GLFYS N GSQ+ GY DAGYLSDPHK SQTGY+FT G TA S
Sbjct: 90 GIKHILRYLQGTIDKGLFYSNNC--GSQLIGYADAGYLSDPHKARSQTGYLFTCGDTAIS 147
Query: 62 WRSSKQSMPATSSNHSEIIALHEATRECVWLRSIISHIRLSCDLPGITKSPTVIYEDNAA 121
WRS+KQ++ ATSSNH+EI+A+HEA+RECVWLRS+ HIR +C L + PT++YEDNAA
Sbjct: 148 WRSTKQTLVATSSNHAEILAIHEASRECVWLRSMTQHIRGTCGLTSNKEVPTILYEDNAA 207
Query: 122 CIAQIREGYIKGDRTKHISPKLFFSHHLQKNGEIDIQKIQSCENYADFFTKSLPTTTFRK 181
CIAQ++ GYIKGDRTKHISPK FF+H+LQ+NG+ID+Q+I+S +N AD FTKSLPT+TF K
Sbjct: 208 CIAQLKGGYIKGDRTKHISPKFFFTHNLQENGDIDVQQIRSSDNLADLFTKSLPTSTFEK 267
Query: 182 LVEGIGMRSLNN 193
+V IGMR L +
Sbjct: 268 MVHKIGMRRLKD 279
>KYP43701.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 264
Score = 273 bits (698), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 126/194 (64%), Positives = 154/194 (79%), Gaps = 2/194 (1%)
Query: 2 GIKHILRYLRGTTDMGLFYSKNSSDGSQVTGYTDAGYLSDPHKGVSQTGYVFTSGGTAFS 61
G+K ILRYLRGT DMGL YS S ++ GY DAGYLSDPH G SQTGY+FTSGGTA S
Sbjct: 68 GVKQILRYLRGTMDMGLLYSNVSK--PELNGYADAGYLSDPHNGKSQTGYLFTSGGTAIS 125
Query: 62 WRSSKQSMPATSSNHSEIIALHEATRECVWLRSIISHIRLSCDLPGITKSPTVIYEDNAA 121
WRS KQ++ ATSSNH+EI+ALHEA+RECVWLRS+I HIR +C L + TVIYEDNAA
Sbjct: 126 WRSVKQTISATSSNHAEILALHEASRECVWLRSVIQHIRETCGLSSGKMTSTVIYEDNAA 185
Query: 122 CIAQIREGYIKGDRTKHISPKLFFSHHLQKNGEIDIQKIQSCENYADFFTKSLPTTTFRK 181
CIAQ+++GYIKGDRTKHI PK FF+H LQ+NG+I++Q+++S +N AD FTKSLP F +
Sbjct: 186 CIAQLKDGYIKGDRTKHILPKFFFTHDLQRNGDINVQQVRSSDNLADLFTKSLPRKVFEQ 245
Query: 182 LVEGIGMRSLNNQM 195
L+ IG+R L + M
Sbjct: 246 LIHKIGLRRLKDCM 259