BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1540.1
(337 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP69746.1 Retrovirus-related Pol polyprotein from transposon TN... 136 3e-35
XP_016540614.1 PREDICTED: uncharacterized protein LOC107841125 [... 141 9e-34
CAN66075.1 hypothetical protein VITISV_026161 [Vitis vinifera] 120 1e-28
>KYP69746.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 222
Score = 136 bits (343), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 97/159 (61%), Gaps = 24/159 (15%)
Query: 1 MGNDATRKVVGIGTIQIKMHDGVVRTITYIKYVPDFKRNLISLGTLDDNGYKYTGEGGVL 60
MGND K +GIGTIQIKMHDGV+RT+T +++VP K+NLIS+G LD +KY EGGV+
Sbjct: 1 MGNDMACKTIGIGTIQIKMHDGVIRTLTEVRHVPYLKKNLISVGVLDTKDFKYNVEGGVM 60
Query: 61 RISKESLINFAERFCEDQGIVRHHTARKTPQQNGVAEHMG-TLLKRARCMLLNARLSEVF 119
ISK S + NGVA+ + TLL++ RC+L N L++ F
Sbjct: 61 EISKGSTV-----------------------VNGVAKRINRTLLEKERCLLSNVGLTKSF 97
Query: 120 WAEVVNTTTYLINISPCTSIECKTPNEELAEKPKDQKIV 158
WAE VN T YL+N SP T+I CKTP E + K + I+
Sbjct: 98 WAEAVNRTCYLVNRSPSTAIGCKTPIEVWSTKRANYSIL 136
>XP_016540614.1 PREDICTED: uncharacterized protein LOC107841125 [Capsicum annuum]
Length = 779
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 103/262 (39%), Positives = 142/262 (54%), Gaps = 48/262 (18%)
Query: 17 IKMHDGVVRTITYIKYVPDFKRNLISLGTLDDNGYKYTGEGGVLRISKESLINF-AERFC 75
++M DGVVRT+ ++YV D KRNLISL TLD NGY+YTGE GVL+++K +LI +R
Sbjct: 142 LEMIDGVVRTLGDVQYVLDLKRNLISLSTLDSNGYRYTGESGVLKVTKGALIVMKGQRKS 201
Query: 76 ED----QG------IVRHHTARKTPQQNGVAEHMG-TLLKRARCMLLNA------RLSEV 118
+ QG IV H T R TPQQNGVAE + T++++ C+L NA
Sbjct: 202 ANLYILQGSMITERIVSHLTIRHTPQQNGVAERINRTIMEKVHCLLSNASEGIDSNKDPS 261
Query: 119 FWAEVVNTTTY---LINISPCTSIECKTPNEELAEKPKDQKIVDS-EWIFKKKEGILGME 174
+++EVV+ + +I+ + EK + D+ + +FKKKEG LG+E
Sbjct: 262 YYSEVVSCDDFGQWMIS---------------MQEKMESLHRNDTWDLVFKKKEGTLGVE 306
Query: 175 DSRYKARLEAKGFTQQEGTDFNEVFSLVGKHSSIRVLL--AAVRSQKRGRERLRLKREIG 232
D RYK RL AKG++Q DF +VFS + KHSSI+ L A V SQ
Sbjct: 307 DFRYKVRLVAKGYSQVPRIDFIDVFSPIVKHSSIQAFLGSAIVPSQSN-------NTSYD 359
Query: 233 VHGVKLQRATQKHQPSIWDTRR 254
VHG + Q H S+ + R
Sbjct: 360 VHG--FSKEQQDHLLSLLNQSR 379
>CAN66075.1 hypothetical protein VITISV_026161 [Vitis vinifera]
Length = 277
Score = 120 bits (302), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 125/275 (45%), Gaps = 81/275 (29%)
Query: 1 MGNDATRKVVGIGTIQIKMHDGVVRTITYIKYVPDFKRNLISLGTLDDNGYKYTGEGGVL 60
MGND ++VGIG+I+ KM DGV+RTI +++V K+N++S+G LDD Y++ + G++
Sbjct: 1 MGNDHALEIVGIGSIKAKMDDGVIRTIPKVRHVKGLKKNMLSMGQLDDLRYEFHVKRGIM 60
Query: 61 RISKESLINF-------------------AERFCED---------QGIVRHHTARKTPQQ 92
++ + + + AE F + +GI R T QQ
Sbjct: 61 KVIRGTFVVMKVEKIAANLYMLHRKTYQDAETFVANSGEKLTMSQEGIQRQKIVAYTSQQ 120
Query: 93 NGVAEHMG-TLLKRARCMLLNARLSEVFWAEVVNTTTYLINISPCTSIECKTPNEELAEK 151
NG+AE TL++R R ML L + +WAE T Y+IN S T+IE KTP E +
Sbjct: 121 NGIAEQTNRTLVERMRAMLKTTGLPKTYWAEATKTAYYIINRSSSTAIEMKTPMEMWTKD 180
Query: 152 -----------------------------------------PKDQKIVDSEWIFKKKEGI 170
P +K + ++W++K K
Sbjct: 181 GEPSNYQEVINNSDSSLWMAIMQEDVEALHKNQIWKLVLLPPGKKKTIGNKWVYKIK--- 237
Query: 171 LGMEDS-----RYKARLEAKGFTQQEGTDFNEVFS 200
DS RY+ARL KG+ + G DFN++FS
Sbjct: 238 ---YDSNDKVERYRARLVVKGYALKIGVDFNKIFS 269