BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1550.1
(159 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP42039.1 Retrovirus-related Pol polyprotein from transposon TN... 220 4e-68
KYP53356.1 Retrovirus-related Pol polyprotein from transposon TN... 222 7e-68
ABG22123.1 polyprotein, partial [Prunus avium] 213 7e-67
>KYP42039.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 394
Score = 220 bits (560), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 99/159 (62%), Positives = 125/159 (78%)
Query: 1 MKDLGASRKILGMEIRGDRFVGKMFLSQKTYIEKVLERFSMTGAKHVGTPLTAHFKLSGV 60
MK+LGA++KILGMEI DR VGK+FLSQ+ YIE++L+RF+M K V TPL AHFKLS
Sbjct: 98 MKELGAAKKILGMEIHRDRQVGKLFLSQQKYIERLLDRFNMNNCKPVSTPLAAHFKLSSD 157
Query: 61 LSPTIDEETEYMSRLPCASTVGSIMYAMVCTRPDISHVVNVVSRYMGRPGRGHWQAVKWV 120
L P EE E MS +P AS VGS+MYAMVCTRPD+++ V++VSRYM PG+ HW AVKW+
Sbjct: 158 LCPQTKEEMERMSHVPYASAVGSLMYAMVCTRPDLAYAVSMVSRYMHNPGKDHWSAVKWI 217
Query: 121 LRYLGGTADVGLVYDRRADTSGSVVGFVDSDFSGDLDRK 159
RYL GT+++GLV+DR T+ +V GFVDSD+ GDLDR+
Sbjct: 218 FRYLKGTSNIGLVFDRNKATTNNVAGFVDSDYGGDLDRR 256
>KYP53356.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 503
Score = 222 bits (566), Expect = 7e-68, Method: Composition-based stats.
Identities = 99/159 (62%), Positives = 125/159 (78%)
Query: 1 MKDLGASRKILGMEIRGDRFVGKMFLSQKTYIEKVLERFSMTGAKHVGTPLTAHFKLSGV 60
MK+LGA++KILGMEI DR VGK+FLSQ+ YIE++L+RF+M K V TPL AHFKLS
Sbjct: 207 MKELGAAKKILGMEIHRDRQVGKLFLSQQKYIERLLDRFNMNNCKPVSTPLAAHFKLSSD 266
Query: 61 LSPTIDEETEYMSRLPCASTVGSIMYAMVCTRPDISHVVNVVSRYMGRPGRGHWQAVKWV 120
L P EE E MS +P AS VGS+MYAMVCTRPD+++ V++VSRYM PG+ HW AVKW+
Sbjct: 267 LCPQTKEEMERMSHVPYASAVGSLMYAMVCTRPDLAYAVSMVSRYMHNPGKDHWSAVKWI 326
Query: 121 LRYLGGTADVGLVYDRRADTSGSVVGFVDSDFSGDLDRK 159
RYL GT+++GLV+DR T+ +V GFVDSD+ GDLDR+
Sbjct: 327 FRYLKGTSNIGLVFDRNKATTNNVAGFVDSDYGGDLDRR 365
>ABG22123.1 polyprotein, partial [Prunus avium]
Length = 276
Score = 213 bits (542), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 98/160 (61%), Positives = 124/160 (77%), Gaps = 1/160 (0%)
Query: 1 MKDLGASRKILGMEIRGDRFVGKMFLSQKTYIEKVLERFSMT-GAKHVGTPLTAHFKLSG 59
MKDLG +RKILGMEI DR GK+ L QK Y++KVL+RF M +K V TPL HFKLS
Sbjct: 28 MKDLGEARKILGMEIERDRAKGKISLCQKQYLKKVLQRFGMNENSKPVSTPLAPHFKLSA 87
Query: 60 VLSPTIDEETEYMSRLPCASTVGSIMYAMVCTRPDISHVVNVVSRYMGRPGRGHWQAVKW 119
+SP DEE+ YM+++P AS VGS+MYAMVCTRPDIS V++VSRYM PG+GHWQAVKW
Sbjct: 88 SMSPNTDEESHYMAQIPYASAVGSLMYAMVCTRPDISQAVSIVSRYMHNPGKGHWQAVKW 147
Query: 120 VLRYLGGTADVGLVYDRRADTSGSVVGFVDSDFSGDLDRK 159
+LRY+ GT DVGL++ + + VVG+VDSD++GDLD++
Sbjct: 148 ILRYILGTVDVGLLFQQDKVSGQCVVGYVDSDYAGDLDKR 187