BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1600.1
(519 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010269979.1 PREDICTED: mitochondrial ribosome-associated GTPa... 303 1e-97
XP_010269978.1 PREDICTED: mitochondrial ribosome-associated GTPa... 305 4e-96
XP_011649569.1 PREDICTED: mitochondrial ribosome-associated GTPa... 267 1e-82
>XP_010269979.1 PREDICTED: mitochondrial ribosome-associated GTPase 1 isoform X2
[Nelumbo nucifera]
Length = 243
Score = 303 bits (777), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 157/242 (64%), Positives = 186/242 (76%), Gaps = 11/242 (4%)
Query: 1 MATATFGRSLGAIVKTAGDKKELGWFTPHMAAASRAILDRIHLVDFTLEIRDARIPISSR 60
MATA R LGA VK AG KK GW++ HMAAASRAIL+RI LVDFTLEIRDARIPISS
Sbjct: 1 MATAALARRLGASVKDAGAKKGSGWYSSHMAAASRAILERIPLVDFTLEIRDARIPISSA 60
Query: 61 YEYLRKFPSSSSKRIIVLNKMDLADRSQTREWVKHFEKHGYMCYGINSHNKENIKQFLNF 120
YE LR FP SS +RIIVLNK DLADR QT+EW+++FE+ +CYGINSHNK+NIK+FLNF
Sbjct: 61 YEDLRDFPPSS-RRIIVLNKTDLADRRQTKEWLRYFEEQSCVCYGINSHNKDNIKEFLNF 119
Query: 121 LQAQVRELKKVDQSKYTTTLMLVGIPNVGKSALANSLHQIGRVSAAEKGKLKHAIVSPVP 180
+QA+VRELKK DQ KYTTT+MLVGIPNVGKS+LANSLHQIGR+SAAEKGKLKH IVSP+P
Sbjct: 120 IQARVRELKKDDQLKYTTTIMLVGIPNVGKSSLANSLHQIGRISAAEKGKLKHTIVSPLP 179
Query: 181 GETKDISSLKVSNFSFHSTFAVFNCYPIACLESQLRLEEITKILMFSLWKCISNSLTYVT 240
GETKDISSLK+ + H V + P S L +E +K+++ + L +
Sbjct: 180 GETKDISSLKIGS---HPNIYVLDT-PGVLHPSILDVEMGSKLVL------TAQGLLVIV 229
Query: 241 WI 242
W+
Sbjct: 230 WL 231
>XP_010269978.1 PREDICTED: mitochondrial ribosome-associated GTPase 1 isoform X1
[Nelumbo nucifera]
Length = 373
Score = 305 bits (780), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 160/236 (67%), Positives = 186/236 (78%), Gaps = 8/236 (3%)
Query: 1 MATATFGRSLGAIVKTAGDKKELGWFTPHMAAASRAILDRIHLVDFTLEIRDARIPISSR 60
MATA R LGA VK AG KK GW++ HMAAASRAIL+RI LVDFTLEIRDARIPISS
Sbjct: 1 MATAALARRLGASVKDAGAKKGSGWYSSHMAAASRAILERIPLVDFTLEIRDARIPISSA 60
Query: 61 YEYLRKFPSSSSKRIIVLNKMDLADRSQTREWVKHFEKHGYMCYGINSHNKENIKQFLNF 120
YE LR FP SS +RIIVLNK DLADR QT+EW+++FE+ +CYGINSHNK+NIK+FLNF
Sbjct: 61 YEDLRDFPPSS-RRIIVLNKTDLADRRQTKEWLRYFEEQSCVCYGINSHNKDNIKEFLNF 119
Query: 121 LQAQVRELKKVDQSKYTTTLMLVGIPNVGKSALANSLHQIGRVSAAEKGKLKHAIVSPVP 180
+QA+VRELKK DQ KYTTT+MLVGIPNVGKS+LANSLHQIGR+SAAEKGKLKH IVSP+P
Sbjct: 120 IQARVRELKKDDQLKYTTTIMLVGIPNVGKSSLANSLHQIGRISAAEKGKLKHTIVSPLP 179
Query: 181 GETKDISSLKVSNFSFHSTFAVFNCYPIACLESQLRLEEITKILMFSLWKCISNSL 236
GETKDISSLK+ + H V + P S L +E +K++ L IS+SL
Sbjct: 180 GETKDISSLKIGS---HPNIYVLDT-PGVLHPSILDVEMGSKLV---LTGAISDSL 228
Score = 211 bits (537), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 101/177 (57%), Positives = 138/177 (77%), Gaps = 1/177 (0%)
Query: 337 IGSHPNIYILDTPGVLPSDILDLEQGAKLALTGAVRDCLVGEYELARYFLSILNSSDQYK 396
IGSHPNIY+LDTPGVL ILD+E G+KL LTGA+ D LV E E+A YFLSILN+S++YK
Sbjct: 190 IGSHPNIYVLDTPGVLHPSILDVEMGSKLVLTGAISDSLVEECEIAEYFLSILNTSNEYK 249
Query: 397 KWATLTSMEEDRGSIE-KTKPSDSSVLNVKKKKIFLTDHTQDLIVQDVRRTLYETISAFE 455
W L + E++ S + KT + + ++++K +LTDHTQD IV+DVRRTL+E+IS+F+
Sbjct: 250 HWENLLAKEDEESSRDHKTNFGGNLEVELRRRKQYLTDHTQDFIVRDVRRTLFESISSFK 309
Query: 456 GSLEDDNEISKLIEAQFVALEKVFRVSSEPGEDVHHRVAKKLLDLYRIGRLGHYTLE 512
G+LED+ E+SKLI+ QF+AL++ F + +D++HRVA KLL+LYR GRLGHYTL+
Sbjct: 310 GNLEDEKELSKLIKVQFIALQEAFHIPLGSAKDINHRVALKLLNLYRTGRLGHYTLD 366
>XP_011649569.1 PREDICTED: mitochondrial ribosome-associated GTPase 1 isoform X3
[Cucumis sativus]
Length = 292
Score = 267 bits (683), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 129/195 (66%), Positives = 154/195 (78%), Gaps = 3/195 (1%)
Query: 1 MATATFGRSLGAIVK--TAGDKKELGWFTPHMAAASRAILDRIHLVDFTLEIRDARIPIS 58
MA AT R +G + AG++ GW+ HM AASRA+ +RI LVDF LE+RDARIP S
Sbjct: 1 MAAATLMRKIGTAINQLAAGNRISSGWYDAHMEAASRAVAERIPLVDFVLEVRDARIPTS 60
Query: 59 SRYEYLRKFPSSSSKRIIVLNKMDLADRSQTREWVKHFEKHGYMCYGINSHNKENIKQFL 118
S YE ++ P SS KRIIVLNK DLAD+SQT W +HFE H + YG+NSHNKENI++FL
Sbjct: 61 SEYEMMKNHPPSS-KRIIVLNKTDLADQSQTEVWTRHFEDHNCISYGVNSHNKENIREFL 119
Query: 119 NFLQAQVRELKKVDQSKYTTTLMLVGIPNVGKSALANSLHQIGRVSAAEKGKLKHAIVSP 178
NFLQA+VRELKK S + TT+MLVGIPNVGKSALANSLHQIGR+SAAEKGKLKHA+VS
Sbjct: 120 NFLQARVRELKKSGHSSHATTMMLVGIPNVGKSALANSLHQIGRISAAEKGKLKHAVVSS 179
Query: 179 VPGETKDISSLKVSN 193
PGETK+ISSLK+++
Sbjct: 180 QPGETKNISSLKIAS 194
Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 72/100 (72%), Gaps = 9/100 (9%)
Query: 337 IGSHPNIYILDTPGVLPSDILDLEQGAKLALTGAVRDCLVGEYELARYFLSILNSSDQYK 396
I SHPNIY+LDTPG+ P I D+E +KLALTGA+RD LVGE+ + +Y L+I+NSS +YK
Sbjct: 192 IASHPNIYVLDTPGIFPPKIDDIEVCSKLALTGAIRDILVGEHVIVQYLLTIVNSSVKYK 251
Query: 397 KWATLTSMEEDRGSIEKTKPSDSSVLNVKKKKIFLTDHTQ 436
KWA L+++ S+E + PS+ K+++ + +DHTQ
Sbjct: 252 KWANLSAI-----SLECSTPSNLE----KQRRRYPSDHTQ 282