BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1700.1
(145 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010269986.1 PREDICTED: protein LSD1 [Nelumbo nucifera] XP_010... 270 2e-91
CBI33909.3 unnamed protein product, partial [Vitis vinifera] 270 3e-90
KVH95251.1 Zinc finger, LSD1-type [Cynara cardunculus var. scoly... 266 9e-90
>XP_010269986.1 PREDICTED: protein LSD1 [Nelumbo nucifera] XP_010269987.1
PREDICTED: protein LSD1 [Nelumbo nucifera]
XP_010269988.1 PREDICTED: protein LSD1 [Nelumbo
nucifera]
Length = 144
Score = 270 bits (689), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 135/145 (93%), Positives = 140/145 (96%), Gaps = 1/145 (0%)
Query: 1 MPVPLAPYPTPPVPFTAPPNGAQSQLVCSGCRNLLLYPAGASSVCCAVCNAVTPVPPPGT 60
MPVPLAPYPT PVPFT PPNG QSQLVCSGCRNLL+YP GA+SVCCAVCNAVT VPPPGT
Sbjct: 1 MPVPLAPYPTAPVPFT-PPNGTQSQLVCSGCRNLLVYPIGATSVCCAVCNAVTVVPPPGT 59
Query: 61 EMAQLVCGGCHTLLMYIRGATSVQCSCCNTVNLALEANQVAHVNCGNCRMLLMYQYGARS 120
EMAQLVCGGCHTLLMYIRGATSVQCSCC+T+NLALEANQVAHVNCGNCRMLLMYQYGARS
Sbjct: 60 EMAQLVCGGCHTLLMYIRGATSVQCSCCHTINLALEANQVAHVNCGNCRMLLMYQYGARS 119
Query: 121 VKCAVCNFVTSVGASPSTTEQKFNN 145
VKCAVCNFVTS+GASPSTTEQKFNN
Sbjct: 120 VKCAVCNFVTSIGASPSTTEQKFNN 144
>CBI33909.3 unnamed protein product, partial [Vitis vinifera]
Length = 230
Score = 270 bits (690), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 132/144 (91%), Positives = 135/144 (93%)
Query: 1 MPVPLAPYPTPPVPFTAPPNGAQSQLVCSGCRNLLLYPAGASSVCCAVCNAVTPVPPPGT 60
MPVPLAPYPTPPVPFT P NGAQSQLVCSGCRNLLLYP GA SVCCAVCN VT VP PGT
Sbjct: 86 MPVPLAPYPTPPVPFTQPANGAQSQLVCSGCRNLLLYPVGAKSVCCAVCNVVTAVPLPGT 145
Query: 61 EMAQLVCGGCHTLLMYIRGATSVQCSCCNTVNLALEANQVAHVNCGNCRMLLMYQYGARS 120
EMAQLVCGGCHTLLMYIRGATSVQCSCC+T+NLALEANQVAHVNCGNCRMLLMYQYGARS
Sbjct: 146 EMAQLVCGGCHTLLMYIRGATSVQCSCCHTINLALEANQVAHVNCGNCRMLLMYQYGARS 205
Query: 121 VKCAVCNFVTSVGASPSTTEQKFN 144
VKCAVCNFVTSVGAS S+TE KFN
Sbjct: 206 VKCAVCNFVTSVGASTSSTEHKFN 229
>KVH95251.1 Zinc finger, LSD1-type [Cynara cardunculus var. scolymus]
Length = 167
Score = 266 bits (681), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 130/144 (90%), Positives = 136/144 (94%)
Query: 1 MPVPLAPYPTPPVPFTAPPNGAQSQLVCSGCRNLLLYPAGASSVCCAVCNAVTPVPPPGT 60
MPVPLAPYP+PPVP T P NG+QSQLVCSGCRNLLLYP GA+SVCCAVCNAVT VPPPGT
Sbjct: 23 MPVPLAPYPSPPVPLTTPANGSQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGT 82
Query: 61 EMAQLVCGGCHTLLMYIRGATSVQCSCCNTVNLALEANQVAHVNCGNCRMLLMYQYGARS 120
EMAQLVCGGCHTLLMYIRGATSVQCSCC+T+NLALEANQVAHVNCGNCRMLLMYQYGARS
Sbjct: 83 EMAQLVCGGCHTLLMYIRGATSVQCSCCHTINLALEANQVAHVNCGNCRMLLMYQYGARS 142
Query: 121 VKCAVCNFVTSVGASPSTTEQKFN 144
VKCAVC F+TSVGAS S TEQKFN
Sbjct: 143 VKCAVCQFITSVGASTSATEQKFN 166