BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1760.1
(189 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAD17357.1 contains similarity to retrovirus-related polyprotein... 136 6e-34
CAE04999.2 OSJNBb0093G06.7 [Oryza sativa Japonica Group] 129 2e-31
AAR06328.1 putative polyprotein [Oryza sativa Japonica Group] 125 6e-30
>AAD17357.1 contains similarity to retrovirus-related polyproteins [Arabidopsis
thaliana] CAB77943.1 putative transposon protein
[Arabidopsis thaliana]
Length = 769
Score = 136 bits (343), Expect = 6e-34, Method: Composition-based stats.
Identities = 70/143 (48%), Positives = 94/143 (65%), Gaps = 1/143 (0%)
Query: 46 GAYVIEVNLADMADSPSWVFDTGCGAHIISELDELKEVRYLTKSEMVLRVANKARVATVA 105
G YVIEVN+ +P W DTGCGAHI + + + + ++ LR+AN ARV+T+
Sbjct: 43 GIYVIEVNVTTSGFTP-WELDTGCGAHICVNMHGINNSITMEEGQVDLRMANGARVSTLV 101
Query: 106 VGTYELSLETGLIVVLHNCYYVPTISRNIISVSVLDKEGYHAIIKDKCYSLYKDEMFYTS 165
VGTY LS +G+++ L NCYYV I++NIISVS LD EG+H +IK+KC S +++MFY S
Sbjct: 102 VGTYSLSFPSGMVLELKNCYYVHAINKNIISVSCLDMEGFHFLIKNKCCSFDRNDMFYGS 161
Query: 166 AKLRNGLYVVNIEGEILIIDTDR 188
A L N LYV+N I I T R
Sbjct: 162 APLENELYVLNQSMPIYNIRTKR 184
>CAE04999.2 OSJNBb0093G06.7 [Oryza sativa Japonica Group]
Length = 923
Score = 129 bits (324), Expect = 2e-31, Method: Composition-based stats.
Identities = 66/134 (49%), Positives = 89/134 (66%), Gaps = 1/134 (0%)
Query: 46 GAYVIEVNLADMADSPSWVFDTGCGAHIISELDELKEVRYLTKSEMVLRVANKARVATVA 105
G VIE+NLA + + SWVFDTG AHI L LK R L + E+ +RV N ARVA VA
Sbjct: 245 GINVIEINLA-TSSTDSWVFDTGLVAHICKSLQGLKRSRSLARGEVDIRVGNGARVAVVA 303
Query: 106 VGTYELSLETGLIVVLHNCYYVPTISRNIISVSVLDKEGYHAIIKDKCYSLYKDEMFYTS 165
VGT LSL +GL++ L+NCY +P + +N+IS S L EGY D S+Y +++FY +
Sbjct: 304 VGTMSLSLPSGLVLELNNCYCIPALCKNVISASCLQAEGYGFRSVDNGCSVYYNDIFYFN 363
Query: 166 AKLRNGLYVVNIEG 179
A + NGLY+VN++G
Sbjct: 364 APMMNGLYIVNLDG 377
>AAR06328.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1063
Score = 125 bits (313), Expect = 6e-30, Method: Composition-based stats.
Identities = 64/134 (47%), Positives = 86/134 (64%), Gaps = 1/134 (0%)
Query: 46 GAYVIEVNLADMADSPSWVFDTGCGAHIISELDELKEVRYLTKSEMVLRVANKARVATVA 105
G VIE+NLA + + SWVFDTG AHI L LK R L + + +RV N RVA VA
Sbjct: 378 GINVIEINLA-TSSTDSWVFDTGSVAHICKSLQGLKRSRSLARGRVDIRVGNGERVAVVA 436
Query: 106 VGTYELSLETGLIVVLHNCYYVPTISRNIISVSVLDKEGYHAIIKDKCYSLYKDEMFYTS 165
VGT LSL +GL++ L+NCY +P + +N+IS S L EGY D S+Y +++FY
Sbjct: 437 VGTMTLSLPSGLVLELNNCYCIPALCKNVISASCLQAEGYGFRSMDNGCSVYYNDLFYFH 496
Query: 166 AKLRNGLYVVNIEG 179
A + NGLY+VN++G
Sbjct: 497 APMMNGLYIVNLDG 510