BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1820.1
(171 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAE02400.1 OSJNBa0024J22.4 [Oryza sativa Japonica Group] CAD4052... 268 3e-83
ADB85430.1 putative retrotransposon protein [Phyllostachys edulis] 266 2e-81
BAA22288.1 polyprotein [Oryza australiensis] 269 1e-80
>CAE02400.1 OSJNBa0024J22.4 [Oryza sativa Japonica Group] CAD40526.2
OSJNBa0023J03.14 [Oryza sativa Japonica Group]
CAH66059.1 OSIGBa0125J07.8 [Oryza sativa Indica Group]
CAH66155.1 OSIGBa0113B06.1 [Oryza sativa Indica Group]
Length = 704
Score = 268 bits (684), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 123/169 (72%), Positives = 147/169 (86%)
Query: 1 LVYGGKDELIVEGHVDVSFQTDRDDFLSQSGYVFCLNGGAVSWKSSKQTTVADSTTEAEY 60
LVYGG++EL+V G+ D SFQTD+DDF SQSG+VFCLNGGAVSWKSSKQ TVADSTTEAEY
Sbjct: 536 LVYGGQEELVVNGYTDASFQTDKDDFRSQSGFVFCLNGGAVSWKSSKQNTVADSTTEAEY 595
Query: 61 LAASEAAKEGVWIKKFISELGVVPSIENGVTIYCDNNGAIAQAKEPRAHQKSKHILRKYH 120
+AASEAAKE VWIKKF+S+LGV+ S + +YCDN+GAIAQAKEPR+HQKSKHILR+YH
Sbjct: 596 IAASEAAKEVVWIKKFVSQLGVMTSTSRPMDLYCDNSGAIAQAKEPRSHQKSKHILRRYH 655
Query: 121 VIREITERKDVVICKVDTDDNVVDPLTKPLPQPKYESHRRGIGIKRINE 169
+IREI R DV ICK+ TD NV DPLTKPLPQPK+E+H R +GI+ +++
Sbjct: 656 LIREIVGRGDVKICKIHTDLNVADPLTKPLPQPKHEAHTRAMGIRYVHD 704
>ADB85430.1 putative retrotransposon protein [Phyllostachys edulis]
Length = 896
Score = 266 bits (681), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 122/167 (73%), Positives = 145/167 (86%)
Query: 1 LVYGGKDELIVEGHVDVSFQTDRDDFLSQSGYVFCLNGGAVSWKSSKQTTVADSTTEAEY 60
LVYGG +EL+V G+ D SFQTD+DD+ SQSG+VF LNGGAVSWKSSKQ TVADSTTEAEY
Sbjct: 729 LVYGGDEELVVNGYTDASFQTDKDDYRSQSGFVFILNGGAVSWKSSKQETVADSTTEAEY 788
Query: 61 LAASEAAKEGVWIKKFISELGVVPSIENGVTIYCDNNGAIAQAKEPRAHQKSKHILRKYH 120
+AASEAAKEGVWI+ FI+ELG+VPS + + +YCDNNGAIAQAKEPR+HQKSKHILR+YH
Sbjct: 789 IAASEAAKEGVWIRNFITELGMVPSASSPMDLYCDNNGAIAQAKEPRSHQKSKHILRRYH 848
Query: 121 VIREITERKDVVICKVDTDDNVVDPLTKPLPQPKYESHRRGIGIKRI 167
+IRE+ +R DV ICKV TD N+ DPLTKPL QPK+E+H R IGI+ +
Sbjct: 849 LIRELVDRGDVKICKVHTDLNIADPLTKPLTQPKHEAHTRAIGIRYL 895
>BAA22288.1 polyprotein [Oryza australiensis]
Length = 1317
Score = 269 bits (687), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 122/169 (72%), Positives = 149/169 (88%)
Query: 1 LVYGGKDELIVEGHVDVSFQTDRDDFLSQSGYVFCLNGGAVSWKSSKQTTVADSTTEAEY 60
LVYGG+++L+V G+ D SFQTD+DD+ SQSG+VFCLNGGAVSWKSSKQ TVADSTTEAEY
Sbjct: 1149 LVYGGEEDLVVSGYTDASFQTDKDDYRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEY 1208
Query: 61 LAASEAAKEGVWIKKFISELGVVPSIENGVTIYCDNNGAIAQAKEPRAHQKSKHILRKYH 120
+AASEAAKE VWIKKF+SELGV+ S +++YCDN+GAIAQAKEPR+HQKSKHILR+YH
Sbjct: 1209 IAASEAAKEAVWIKKFVSELGVMTSTTGPMSLYCDNSGAIAQAKEPRSHQKSKHILRRYH 1268
Query: 121 VIREITERKDVVICKVDTDDNVVDPLTKPLPQPKYESHRRGIGIKRINE 169
+IREI +R DV ICKV TD N+ DPLTKPLPQPK+E+H R +GI+ +++
Sbjct: 1269 LIREIVDRGDVKICKVHTDLNIADPLTKPLPQPKHEAHTRAMGIRYLHD 1317