BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1900.1
(254 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ADB85429.1 putative retrotransposon protein [Phyllostachys edulis] 189 3e-51
BAA22288.1 polyprotein [Oryza australiensis] 177 2e-47
ADB85430.1 putative retrotransposon protein [Phyllostachys edulis] 176 1e-46
>ADB85429.1 putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 189 bits (480), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/288 (41%), Positives = 161/288 (55%), Gaps = 45/288 (15%)
Query: 5 NFNFRSLLEKEKLNEHNFLYWERNLGIVLRMEGKQNVLETPISILDATSTPEE-KEHEES 63
+F RS+L+KEKLN NF W RNL IVLR + K++VLE PI + A + K +
Sbjct: 95 SFALRSILKKEKLNGTNFADWSRNLRIVLRQDKKEHVLEEPIPDVPADNAAATLKSAYKK 154
Query: 64 VRKRAEPITCLMLATMEPTLQEKFIDMDACSMIRQLREMFQKQSRLER------------ 111
+ ++CLMLA M LQ++F +++A MI L+ MF+ Q+R +R
Sbjct: 155 ACDESLDVSCLMLAAMNSDLQKQFENIEAYDMIVALKGMFETQARTKRFEISKNLFSCKL 214
Query: 112 ------------LIG---KLAKLGYPYSQQTATDTILHSLHSGFNQFKMNYNMNGWDKTL 156
++G L KLG+P SQ+ ATD IL SL + + QF +N++MNG DK L
Sbjct: 215 AEGSPVSPHMIKMVGYTQSLEKLGFPLSQELATDLILASLPASYGQFILNFHMNGLDKNL 274
Query: 157 EELHAMLLTTENEVAIVETKKDVLMVQNDKGFKKGGKQKKKTTSKGKGKRVA------KP 210
ELH +L T E+ + + + V+MVQ FKK K +T KGKGK+V KP
Sbjct: 275 TELHMLLKTAEDSIKKINSH--VMMVQKSTSFKK----KARTWVKGKGKKVLDGIQTNKP 328
Query: 211 KYK---GPPFDTKCFYCDGKGHWKRNCPKFLED--KNNGTVVSTSGIN 253
K K GP + +CFYC GHWKRNC K+L D KN GT STSGIN
Sbjct: 329 KLKTKSGPTQENECFYCKEPGHWKRNCKKYLADLKKNGGTKPSTSGIN 376
>BAA22288.1 polyprotein [Oryza australiensis]
Length = 1317
Score = 177 bits (450), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/285 (41%), Positives = 148/285 (51%), Gaps = 35/285 (12%)
Query: 2 TKENFNFRSLLEKEKLNEHNFLYWERNLGIVLRMEGKQNVLETPISI-LDATSTPEEKEH 60
T FN RS+LEKEKLN NF+ W RNL IVL+ E K+ VLE P L +T +
Sbjct: 6 TPSTFNLRSILEKEKLNGTNFMDWYRNLRIVLKQERKEYVLEVPYPEELPNNATATARRG 65
Query: 61 EESVRKRAEPITCLMLATMEPTLQEKFIDMDACSMIRQLREMFQKQSRLERL-------- 112
E A I+CLMLATM P LQ+++ DA + I+ LR MF+ Q+R ER
Sbjct: 66 FEKHTNDALDISCLMLATMSPELQKQYESSDAHTTIQGLRGMFENQARDERFNTSKSLFA 125
Query: 113 -------------------IGKLAKLGYPYSQQTATDTILHSLHSGFNQFKMNYNMNGWD 153
I L KLG+P SQ+ ATD IL SL F F +NY+MN D
Sbjct: 126 CRLVEGNPVSPHVIKMIGYIESLEKLGFPLSQELATDVILQSLPPSFEPFILNYHMNNMD 185
Query: 154 KTLEELHAMLLTTENEVAIVETKKDVLMVQNDK---GFKKGGKQKKKTTSKGKGKRVAKP 210
+TL ELH ML T E +I + V+M+QN K KK ++K T + AK
Sbjct: 186 RTLAELHGMLKTVEE--SIQKNGHHVMMMQNAKRKPPVKKLCTKRKLTPDEIASASNAKK 243
Query: 211 KYKGPPF-DTKCFYCDGKGHWKRNCPKFLED-KNNGTVVSTSGIN 253
KG D CFYC GHWKRNC K++ED K + S SGIN
Sbjct: 244 GKKGSAASDAVCFYCKETGHWKRNCKKYMEDLKKKQSTTSASGIN 288
>ADB85430.1 putative retrotransposon protein [Phyllostachys edulis]
Length = 896
Score = 176 bits (445), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 154/288 (53%), Gaps = 48/288 (16%)
Query: 5 NFNFRSLLEKEKLNEHNFLYWERNLGIVLRMEGKQNVLETPI------SILDATSTPEEK 58
+F RS+LEKEKLN NF W RNL IVLR + K++VLE PI + A T +K
Sbjct: 12 SFALRSILEKEKLNGTNFADWSRNLRIVLRQDKKEHVLEEPIPDVPTENAAAAIKTAYKK 71
Query: 59 EHEESVRKRAEPITCLMLATMEPTLQEKFIDMDACSMIRQLREMFQKQSRLER------- 111
+ES+ ++CLMLA M LQ++F +++A MI L+ MF+ Q+R ER
Sbjct: 72 ACDESLD-----VSCLMLAAMNSDLQKQFENIEAYDMIVALKGMFETQARTERFEISKNL 126
Query: 112 -----------------LIG---KLAKLGYPYSQQTATDTILHSLHSGFNQFKMNYNMNG 151
++G L KLG+P SQ+ ATD IL SL + QF +N++MNG
Sbjct: 127 FGCKLAEGGPVSPHVIKMVGYTQSLEKLGFPLSQELATDLILASLPESYGQFILNFHMNG 186
Query: 152 WDKTLEELHAMLLTTENEVAIVETKKDVLMVQNDKGFKKGGKQKKKTTSKGKGK---RVA 208
DK L ELH ML T E V + V+MVQ FKK K K K K +
Sbjct: 187 LDKNLTELHMMLKTAEGSVK--KCNNHVIMVQKSTSFKKKAKTWIKKKGKAKVSDKIQTD 244
Query: 209 KPKYK---GPPFDTKCFYCDGKGHWKRNCPKFLED--KNNGTVVSTSG 251
KPK K GP + +CFYC GHWKRNC K+L D +N GT ST+G
Sbjct: 245 KPKTKTKSGPTQENECFYCKELGHWKRNCKKYLADQKRNGGTKTSTTG 292