BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1940.1
(146 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010689051.1 PREDICTED: uncharacterized protein LOC104902832 [... 147 6e-43
XP_010666016.1 PREDICTED: uncharacterized protein LOC104883233 [... 124 6e-32
ADB85429.1 putative retrotransposon protein [Phyllostachys edulis] 125 8e-31
>XP_010689051.1 PREDICTED: uncharacterized protein LOC104902832 [Beta vulgaris
subsp. vulgaris]
Length = 149
Score = 147 bits (372), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 79/148 (53%), Positives = 103/148 (69%), Gaps = 8/148 (5%)
Query: 1 MIRLIGKLAKLGYPYNQQTATDTILHSLHSGFNQFKMNYNMNGWDNTLEELHDMLLTAEN 60
MI + +LG+PY+Q+ ATD ILHSLH GFN F++N+NMNG TL ELH ML+TAE
Sbjct: 1 MIGYFEAMERLGFPYSQELATDIILHSLHKGFNTFRLNFNMNGVSKTLAELHGMLMTAEQ 60
Query: 61 DVAIVETKKDVLMVQKDKGFKK--GGKQKKETTSKGKGKRVAKPKDKGPP---SDTKCFY 115
++ I KK+VLMVQK+KGFKK GK+K++ + K KP+ K P ++ KCFY
Sbjct: 61 NITIA-PKKEVLMVQKEKGFKKEWAGKKKQDKGKQVATKTAIKPQAKAKPKVAANAKCFY 119
Query: 116 CDGKGHWKRNCLKFLEDKKNGTLVSTSG 143
CD GHWKRNC K+L+DKK+G S+SG
Sbjct: 120 CDQIGHWKRNCPKYLKDKKSG--ASSSG 145
>XP_010666016.1 PREDICTED: uncharacterized protein LOC104883233 [Beta vulgaris
subsp. vulgaris]
Length = 317
Score = 124 bits (311), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 72/139 (51%), Positives = 87/139 (62%), Gaps = 3/139 (2%)
Query: 8 LAKLGYPYNQQTATDTILHSLHSGFNQFKMNYNMNGWDNTLEELHDMLLTAENDVAIVET 67
L +LG + D LHSLH G QF +N+NMN D T+ EL ML TAE + V
Sbjct: 7 LERLGVTLVDELPIDITLHSLHKGCGQFMLNFNMNELDKTMNELLGMLKTAEPSIK-VAP 65
Query: 68 KKDVLMVQKDKG-FKKGGKQKKETTSKGKGKRVAKPKDKGPPSDTKCFYCDGKGHWKRNC 126
K VLM+QK KG FKK G +K+ SKGKGK+V K K G D +CF+ GHWKRNC
Sbjct: 66 KNHVLMIQKKKGVFKKQGNKKQYPQSKGKGKQVVKTK-AGATLDQECFHYHKPGHWKRNC 124
Query: 127 LKFLEDKKNGTLVSTSGIN 145
K+LEDKKNG + STSGI+
Sbjct: 125 PKYLEDKKNGKIASTSGIH 143
>ADB85429.1 putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 125 bits (315), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 78/159 (49%), Positives = 99/159 (62%), Gaps = 20/159 (12%)
Query: 1 MIRLIG---KLAKLGYPYNQQTATDTILHSLHSGFNQFKMNYNMNGWDNTLEELHDMLLT 57
MI+++G L KLG+P +Q+ ATD IL SL + + QF +N++MNG D L ELH +L T
Sbjct: 224 MIKMVGYTQSLEKLGFPLSQELATDLILASLPASYGQFILNFHMNGLDKNLTELHMLLKT 283
Query: 58 AENDVAIVETKKDVLMVQKDKGFKKGGKQKKETTSKGKGKRVA------KPKDK---GPP 108
AE+ + + + V+MVQK FKK K T KGKGK+V KPK K GP
Sbjct: 284 AEDSIKKINSH--VMMVQKSTSFKK----KARTWVKGKGKKVLDGIQTNKPKLKTKSGPT 337
Query: 109 SDTKCFYCDGKGHWKRNCLKFLED-KKN-GTLVSTSGIN 145
+ +CFYC GHWKRNC K+L D KKN GT STSGIN
Sbjct: 338 QENECFYCKEPGHWKRNCKKYLADLKKNGGTKPSTSGIN 376