BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1970.1
(216 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_007024240.1 NDH-dependent cyclic electron flow 1 isoform 1 [T... 243 5e-79
XP_017249248.1 PREDICTED: photosynthetic NDH subunit of subcompl... 241 4e-78
XP_017641031.1 PREDICTED: photosynthetic NDH subunit of subcompl... 239 1e-77
>XP_007024240.1 NDH-dependent cyclic electron flow 1 isoform 1 [Theobroma cacao]
EOY26862.1 NDH-dependent cyclic electron flow 1 isoform
1 [Theobroma cacao]
Length = 194
Score = 243 bits (621), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 120/174 (68%), Positives = 138/174 (79%), Gaps = 11/174 (6%)
Query: 40 FTSTTTARFGVSLTAYNPSRRLSLFHLGSGGKIRAVGSVPGVESETTLVEEPPSIDFAFV 99
FTS++ G+S R LS+ S G+IRAV +V ES EEPP++DFAFV
Sbjct: 22 FTSSSHKALGLS-------RHLSI----SRGRIRAVRTVLESESLAREPEEPPAVDFAFV 70
Query: 100 SSVLLPDGTPDIHTRSACGGQKLRDIMLDSDIELYGPYARPLLNCGGGGTCGTCIVEVIQ 159
SVLLPDGTPD+H RSACGGQKLRDIMLD++IELYGPYARPLLNC GGGTCGTC+VEV++
Sbjct: 71 HSVLLPDGTPDVHFRSACGGQKLRDIMLDNNIELYGPYARPLLNCAGGGTCGTCMVEVVE 130
Query: 160 GKEHLSLRTDKEKEILKKKPKTWRLACQTNVGKTDSRGQVVIQQLPEWKAHEWS 213
GKE L+ RTDKEKE LK+KPK WRLACQT VGK DSRG +VIQQLPEWKAHEW+
Sbjct: 131 GKELLTPRTDKEKEKLKRKPKNWRLACQTTVGKPDSRGLLVIQQLPEWKAHEWT 184
>XP_017249248.1 PREDICTED: photosynthetic NDH subunit of subcomplex B 3,
chloroplastic [Daucus carota subsp. sativus]
Length = 197
Score = 241 bits (615), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 112/150 (74%), Positives = 128/150 (85%), Gaps = 1/150 (0%)
Query: 68 SGGKIRAVGSVPGVESET-TLVEEPPSIDFAFVSSVLLPDGTPDIHTRSACGGQKLRDIM 126
S G+IRAVG++P ++ET T E+PPS+ FAFVSSVLLPDGTPD+H R+ACGGQKLRDIM
Sbjct: 42 SRGRIRAVGTIPENQAETATTSEDPPSVKFAFVSSVLLPDGTPDVHFRTACGGQKLRDIM 101
Query: 127 LDSDIELYGPYARPLLNCGGGGTCGTCIVEVIQGKEHLSLRTDKEKEILKKKPKTWRLAC 186
LD++IELYGPY+RPLLNCGGGGTC TC+VEV+ GKE LS RTDKEKE LKK PK WRLAC
Sbjct: 102 LDTNIELYGPYSRPLLNCGGGGTCATCVVEVVDGKEILSPRTDKEKEKLKKNPKNWRLAC 161
Query: 187 QTNVGKTDSRGQVVIQQLPEWKAHEWSIRK 216
QT VG +DS G VVIQQLPEWK HEW+ K
Sbjct: 162 QTTVGTSDSDGVVVIQQLPEWKGHEWTYGK 191
>XP_017641031.1 PREDICTED: photosynthetic NDH subunit of subcomplex B 3,
chloroplastic [Gossypium arboreum]
Length = 192
Score = 239 bits (611), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 118/165 (71%), Positives = 132/165 (80%), Gaps = 3/165 (1%)
Query: 55 YNPSRRLSLFHLG-SGGKIRAVGSVPGVESETTLVE--EPPSIDFAFVSSVLLPDGTPDI 111
+N S R S HL S KIRAV +VP ES E EPP++DFAFV SVLLPDGTPD+
Sbjct: 21 FNFSSRSSTTHLRFSTPKIRAVSTVPDSESTAKDKEPDEPPAVDFAFVHSVLLPDGTPDV 80
Query: 112 HTRSACGGQKLRDIMLDSDIELYGPYARPLLNCGGGGTCGTCIVEVIQGKEHLSLRTDKE 171
H R ACGGQKLRDIMLD+++ELYGPY RPLLNC GGGTCGTC+VEV++GKE L+ RTDKE
Sbjct: 81 HFRRACGGQKLRDIMLDNNMELYGPYGRPLLNCAGGGTCGTCMVEVVEGKELLTPRTDKE 140
Query: 172 KEILKKKPKTWRLACQTNVGKTDSRGQVVIQQLPEWKAHEWSIRK 216
KE LKKKPK WRLACQT VGK DS+G +VIQQLPEWKAHEWS K
Sbjct: 141 KEHLKKKPKNWRLACQTIVGKPDSKGLLVIQQLPEWKAHEWSYEK 185